Gene Dd1591_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3895 
Symbol 
ID8118856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4401797 
End bp4402756 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content45% 
IMG OID644854270 
Productbiotin--protein ligase 
Protein accessionYP_003006174 
Protein GI251791453 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.282712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT ATACCGTCCC GCTGAAACTA ATCTCTATTC TCTCGAGTGG TGAATTCTAT 
TCGGGCGAGT ATCTTGGCGA ACTGATGGGG ATGAGCCGTG CTGCCATCAA TAAACATGTT
CAGACCATTA AAGAGTGGGG ATTGGATGTA TATACGGTAA CAGGGAAAGG CTATGCGCTT
TCTTCGCCTA TTCAATTGCT CGATGCAGAT AAAATCCGCT CGGAAATACC AGATGGCAAT
ATAGCTGTTT TGCCTGTTAT TGATTCTACT AATCAATATC TGTTGGACCG TCTCGACTCG
ATATCGTCAG GTGATGCCTG TATCGCCGAG TATCAGCAGG CAGGTCGAGG CCGTCGTGGG
CGACAATGGT TTTCTCCCTT TGGTAGTAAT CTGTATTTAT CACTGTACTG GCGTCTGGAG
CAAGGCCCTG CCGCAGCGGT TGGTGTTAGC TTGGTGATTG GCATCATCAT GGCTGAGGTT
TTACACCAAC TGGGGGCCGA AGGCGTTCGT GTTAAATGGC CGAATGACCT GTATCTGAAT
GATAAAAAAC TGGCAGGTAT TCTTGTTGAA CTAAATGGTC GTACGGGAGA TGCTGCACAT
CTGGTTATTG GTGCGGGCAT TAACTTACGT ATGAACTCTT CAGGCTCAAA TGTGATCAAT
CAAGATTGGA TCAATTTACA AGATGCAGGG ATAGATATTG ATCGCAATAT GCTGGCTGTG
AAACTCATTA CCGAGTTACG CACAGCATTA ACTGTTTATG AGCAGCAAGG TTTAACACCG
TTCATTTCTC GCTGGAGCAC GTTGGATAAT TTTTATAATC GGGAAGTAAA ATTAATTGTT
GGTAATAGAG AAATTATCGG CGTTGATAAA GGGATTGACC GTCAGGGTGC ATTGTTGCTG
GAAAAGGATG GTGAAGCTCA ACCTTATATC GGTGGCGAAA TTTCCTTGCG TGGATGGTAA
 
Protein sequence
MKDYTVPLKL ISILSSGEFY SGEYLGELMG MSRAAINKHV QTIKEWGLDV YTVTGKGYAL 
SSPIQLLDAD KIRSEIPDGN IAVLPVIDST NQYLLDRLDS ISSGDACIAE YQQAGRGRRG
RQWFSPFGSN LYLSLYWRLE QGPAAAVGVS LVIGIIMAEV LHQLGAEGVR VKWPNDLYLN
DKKLAGILVE LNGRTGDAAH LVIGAGINLR MNSSGSNVIN QDWINLQDAG IDIDRNMLAV
KLITELRTAL TVYEQQGLTP FISRWSTLDN FYNREVKLIV GNREIIGVDK GIDRQGALLL
EKDGEAQPYI GGEISLRGW