Gene Dd1591_3871 details

Gene Information

• Locus tag: Dd1591_3871
• ID: 8118828
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 4376416
• End bp: 4377051
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644854242
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_003006150
• Protein GI: 251791429
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCG CATTTCCCAC CACCGATGCA CGGCTGGGGC TCTATCCGGT GGTCGATAGC 
ATAGCGTGGA TTGAACGCCT GCTGGATGCG GGTGTTCGTA CCCTCCAGTT GCGTATCAAA 
GACCTGCCGG CAGAGCAGGC CGAGCCTGAC ATTACCCGAG CGATTGCGCT TGGCCGCCAG 
TATCAGGCGC GGCTGTTCAT CAACGACTAC TGGCAACTGG CGGTGAAACA TCAGGCATAT 
GGCGTACATC TCGGGCAGGA GGATCTCGAC ACCGCCGATC TGGACGCGAT TCGCGCCGCC 
GGTCTGCGCC TGGGGGTTTC TACCCATGAC GACGCCGAAC TGGCGCGCGC CGTCGCCCTC 
GCACCGTCTT ACATCGCGCT GGGCCATATT TTCCCGACCC AAACCAAAGC CATGCCATCA 
GCACCGCAAG GTCTGGTGGA GTTGGCCCGC CATATCCGCA CGCTGGACGG ACGCTTTCCC 
ACCGTCGCCA TCGGCGGCAT CAGCATTGAC CGGGTGCCGG CGGTACTGGA AACCGGGGTC 
GGTAGCATCG CCGTGGTCAG CGCCATCACA CAGGCCGCTG ACTGGCGCGC CGCTACCGCG 
ACGTTGCTGC GCTTAATTGA AGGGCGGGAG GCGTAA 

 

Protein sequence

MKRAFPTTDA RLGLYPVVDS IAWIERLLDA GVRTLQLRIK DLPAEQAEPD ITRAIALGRQ 
YQARLFINDY WQLAVKHQAY GVHLGQEDLD TADLDAIRAA GLRLGVSTHD DAELARAVAL 
APSYIALGHI FPTQTKAMPS APQGLVELAR HIRTLDGRFP TVAIGGISID RVPAVLETGV 
GSIAVVSAIT QAADWRAATA TLLRLIEGRE A