Gene Dd1591_3782 details

Gene Information

• Locus tag: Dd1591_3782
• ID: 8117215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 4278390
• End bp: 4280438
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644854149
• Product: LppC family lipoprotein
• Protein accession: YP_003006061
• Protein GI: 251791340
• COG category: [R] General function prediction only
• COG ID: [COG3107] Putative lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0529967
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCCGT TAAATTCTGT CCGTACCCAT GCAGGCCGCT TGGTTCCTGT CATGCTGGCG 
GCACTGTTTC TCGCTGGCTG CCCCAGCCAA GCCCCACAAA GTCCCGCAAT GCAGCAACGC 
GTAGAGGGCA AAGCCGGCGC ATCCTCCGAT TACTACCTGC AGCAGATGCA GCAAAGTAGT 
GATGATAGCA AGGCTGACTG GCAATTACTT GCGATTCATG CCTTGATTCA GGAGGGGAAA 
CTGCCTCAGG CCGGCAACCA GTTAGGTACG CTGCCGTCCC AACTTGGCGA CAAACAGCGC 
CAGGAACAAC GCCTGCTCAC CGCTGAACTG GCGGTCGCCC AGAACGACAT GAACGCCGCC 
AACACCATGC TGGCGCAACT GGACGTGAAA TCGCTGTCGC CCCAACAGCA GGAACGCTAC 
TACCAGGCAC AAATCAAAGC CGCGCAGGAT CGCACCTCGC TGACGTTGAT CCGTGCCTAT 
ATCGGGCTGG AACCGTTGCT GCAAGGGGAT GCCCACCAGC GGAATATCGA CCAAACCTGG 
ACTGCGCTGA CCCGCCTTAA TCAGCAGGAT CTCAGCTCGA TGGTCATCAA CGTCGACGAA 
AATACCCTGC AAGGCTGGCT GGATCTGCTG AACCTCTGGC AGACGAAAGC GCAGGTTCCC 
TCCGATCTGC AAGCGGCCAT AGAAGACTGG AAGAAACGTT ACCCACGCCA CCCGGCGGCT 
AAACAACTGC CATCGCAATT GGGTGGTACT CCGCCTGCGG CGGCGGCTCC GACTACCGGA 
GAAACCGCTC CGACGGGCGG TAACGCCATC GCGTTGCTGT TGCCGTTAAA CGGACAGGCG 
CAAGCGTTCG CCAATGCTAT TCAGCAAGGG TTTAGCGCCG CCAGAAGCGG CCAGGCTTCG 
CTGGCGATGC CGGCTCAACC GGCCCAGTTG GCGCAGGCAG CCAATAACGC AGCAGCGGCT 
ACCCCGGGAG CGCCTGCCGT GCCGTCGCCT GCGTCGAGCA CGCCATCCGC CGTTTCGCCA 
ACGCCTGCAG CGGCAACAAC CGTTATGCCG GCGCTAACGG CTGCGACCGC CGGCACGATT 
CCGGTGAAAG TCTATGACAC CTCGAATCAG GCACTGGCTA ATGTGATTGC TCAGGCGCAG 
AAAGACGGCG CTACCACCAT CGTCGGGCCG CTACTCAAAA ACGAGGTGGA ACAGTTGCCG 
GGGCTTAACC CTTCACTGAA TGTGCTGGCG CTGAATCAAC CGGAGCACAT CCAGCCGAAT 
CCGAATATCT GCTATTTCGC GCTATCGCCG GAAGATGAGG CGGCCGACGC GGCACAATTC 
ATCCACAAAC AGGGCAAACA GCACCCGCTG ATTCTGGCGC CGCGCGGCAA TCTGGGAGAC 
CGGGTGGTGG CGGCGTTTGC TAAGTCCTGG CAACAACAGT CCGGCGGCGT GGTATTACAA 
CAACGCACCG GCAGCATGTA TGACCTGAAA CAAGCGATCA ACAGCGGTGC GGGCATTCCA 
TTAAATGGTC AGCCGGTTAT CACGGCGGCA TCTGCGCCGC AGCCCTCGAC CACGGTTGGC 
GGCCTGACCA TACCGAATCA AGCGCCGCCG ATAGCGGCCG TCACCAGCGA CGGCAACGTG 
GATGCGATTT ATATCATCGC AACGCCAGAC GAACTGGCCT TGCTCAAGCC CATGATCGAC 
ATGCGCAACA AGGGGGCCTC GCGCCCGGCG CTCTACGCCA GCTCACGCAG TTATCAGGCA 
GGTTTGGGGC CGGATTTCCG GTTTGAAATG GAAGGACTAC AGTTTAGCGA TATCCCATTA 
CTAACCGGCG CCAGCCCGGC ATTAATGCAG CAAGTCAGTA CCCAGTTCCG CAACGACTAT 
TCGCTGGTTC GACTGTTCGC CATGGGGATG GACGCCTGGA AACTGGCCAG CGACTTTTCG 
CAATTGCACC AACCGGGAAG TTCTCTCTCC GGTGCAACCG GTATACTCAG CGCCTCGTCG 
GATTGCGTCG TCAACCGTAA ACTTACCTGG CTGCAGTTCC GCCAGGGACA GTTGGTGCCG 
GCCTCCTGA 

 

Protein sequence

MLPLNSVRTH AGRLVPVMLA ALFLAGCPSQ APQSPAMQQR VEGKAGASSD YYLQQMQQSS 
DDSKADWQLL AIHALIQEGK LPQAGNQLGT LPSQLGDKQR QEQRLLTAEL AVAQNDMNAA 
NTMLAQLDVK SLSPQQQERY YQAQIKAAQD RTSLTLIRAY IGLEPLLQGD AHQRNIDQTW 
TALTRLNQQD LSSMVINVDE NTLQGWLDLL NLWQTKAQVP SDLQAAIEDW KKRYPRHPAA 
KQLPSQLGGT PPAAAAPTTG ETAPTGGNAI ALLLPLNGQA QAFANAIQQG FSAARSGQAS 
LAMPAQPAQL AQAANNAAAA TPGAPAVPSP ASSTPSAVSP TPAAATTVMP ALTAATAGTI 
PVKVYDTSNQ ALANVIAQAQ KDGATTIVGP LLKNEVEQLP GLNPSLNVLA LNQPEHIQPN 
PNICYFALSP EDEAADAAQF IHKQGKQHPL ILAPRGNLGD RVVAAFAKSW QQQSGGVVLQ 
QRTGSMYDLK QAINSGAGIP LNGQPVITAA SAPQPSTTVG GLTIPNQAPP IAAVTSDGNV 
DAIYIIATPD ELALLKPMID MRNKGASRPA LYASSRSYQA GLGPDFRFEM EGLQFSDIPL 
LTGASPALMQ QVSTQFRNDY SLVRLFAMGM DAWKLASDFS QLHQPGSSLS GATGILSASS 
DCVVNRKLTW LQFRQGQLVP AS