Gene Dd1591_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3680 
Symbol 
ID8120678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4172124 
End bp4172528 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content52% 
IMG OID644854054 
ProductPilT protein domain protein 
Protein accessionYP_003005967 
Protein GI251791246 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAT ACCTGCTTGA TACCAACATG TGCATTTACA CCATAAAGAA CAAGCCGCAA 
GAGGTCAGAG AGGCGTTCCA GCGTTATTAC GGGCAATTTG CGATAAGCAC CATCACGTTG
ATGGAGCTTA TCTATGGCGC GGAAAAGTCG GCCAATCCAG AAAAGAATCT GGCGGTAATA
GAAGGATTTT CCGCACGTCT GGAAATCCAG CCCTATGGGT TTGATGCCGC CGTGCATACC
GGCCAAATCC GTGCCGAGCT GGCAAAAAAG GGAACGCCGA TTGGCCCGTA TGATGCGATG
CTGGCAGGCC ATGCGCGCTC GGCAGGCTTG ATATTGGTGA CGAACAATGT CCGTGAGTTT
GAGCGCGTGC CGGGGCTGCG TGTGGAGAAC TGGCTTAACC CATAA
 
Protein sequence
MLKYLLDTNM CIYTIKNKPQ EVREAFQRYY GQFAISTITL MELIYGAEKS ANPEKNLAVI 
EGFSARLEIQ PYGFDAAVHT GQIRAELAKK GTPIGPYDAM LAGHARSAGL ILVTNNVREF
ERVPGLRVEN WLNP