| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3564 |
|---|
| Symbol | |
|---|
| ID | 8120028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4042555 |
|---|
| End bp | 4044912 |
|---|
| Gene Length | 2358 bp |
|---|
| Protein Length | 785 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644853939 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_003005852 |
|---|
| Protein GI | 251791131 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAA AACATTCCTC CACGTCTGCG CGTCAGTTCC ACCCCGTGGC GCAGGGAAAA
CCGGGCAAGG CCCTGTTCCG GCCACAGCCG CAGGCACATG CCGTGCCGGA GCAGGCGCCG
CATCGCCACG AACAAGCCCC GAAAGATCAG TCATGCGCCC ATCACTGCTG CGACAAGGCG
ACGCCGACTG TTCCCGTCTC AGCGCTGGCA GCGGCAGAGC GCACCGGCGA CCAGCAACGT
ACGCCTATTC GCATCATGCA GATGGATTGC CCGACCGAAG AAACGCTGCT GCGTAAAAAA
CTCGACACCC TGCCGGAAGT CAGCGCGCTG GAATTCAATC TGATGCAACG GGTGATGACC
GTCACGCACC ATTACGACGG GCTGGACAAG GTACTGGCGG CGATCCGCTC GCTAGGGTTC
GAACCCGAAA TCCGCACCGG GAATGCGCGC GAGCCTCTGC CGCCGGAGCC GAAAAAATCC
TGGTGGCCGC TGGGGCTGGC GGTGGTCGCT GCCGGGGCGG CGGAAGCGGT GGAGTGGAGC
GCGCTGCCGG AATGGTGGGC CGCGGTACTG GCGATTCTCG CCGTCGCTTC CAGCGGGCTG
ACCACCTATC GCAAAGGCTG GATCGCCCTT CGTACCGGCA ACCTGAATAT TAATGCGCTG
ATGAGCATCG CGGTAACCGG CGCGCTTTTC CTGCAACAGT GGCCGGAAGC GGCGATGGTG
ATGGTGCTGT TTACGCTTGC CGAGCACATT GAGGCGCGCT CGCTGGACAG AGCCCGCAAC
GCCATCGCCG GGTTGATGAA TCTGGCGCCG GACACCGCCA CGGTACAGCA GCCGGACGGC
AGTTGGCGCG ACCAGGAGGC CAACACCGTC ACCCCCGGCA GCATCGTGCG GGTACGGCCC
GGCGAGCGTA TCGCGCTGGA CGGCGACATC ACCCGCGGCC ATTCCGCGGT CAATCAGGCA
CCGATTACCG GTGAAAGCCT GCCGGTGGAT AAACGCGTCG GCGACAGCGT ATTTGCCGGC
ACCATCAATG AAAGCGGTTC GTTTGAATAC CGGGTGACGG CGGCCGCGGC CAACACCACA
CTGGCGCGGA TTATCCACGC GGTGGAACAG GCGCAAGGCA CCAAAGCGCC GACCCAGCGA
TTTGTCGATC AGTTCGCCCG CGTTTACACC CCGCTGGTCT TTCTCGGCGC ACTGCTGGTG
GCAGTACTGC CGCCGCTGTT TACCGGTGGT AGCTGGCTGG AGTGGACCTA CAAGGCACTG
GTGCTGCTGG TAATCGCCTG TCCGTGCGCG CTGGTAATCT CCACCCCGGT GACCATCGTC
AGCGGGCTGG CGGCGGCGGC ACGGCGCGGT ATTCTGATAA AAGGCGGCGT CTTTCTGGAA
AAAGGCCATG CGCTCTCCTG GCTGGCGCTG GACAAAACCG GCACGCTGAC TCACGGCAAA
CCGGTGCAGA CCGGCTTTGA AGCGGTCGCC GACCTTGACG AGGCCCACTG CCGGCAACTG
GCCGCCAGCC TGGCCGGCCG TTCAGACCAC CCGGTATCGC AGGCGGTGGC GAGAGCCGCG
CAAGACGCCG GCACGCCGTT GATCGACGTC GATAACTTCA GTGCCGTCGC CGGGCAGGGT
GTCATCGGTA CGCTGCAAGG CCAACGTTAT TTTCTCGGCA ATCTGCGGCT GGCCCGCGAG
CGGCTGGGCG AGACGGCCGA AGGTATTGTC GGGCGCTTAA CCACGCTGGA ACAGGCAGGC
AATACCACGA TCATTCTGGG CGACGAACAA CGCGTTCTGG CACTGATGGC GGTGGCCGAC
ACCGTGAAAC CATCCAGTCA GGAGGCTATC AACGCACTGC ATCAGGCCGG TATCAAAACC
CTGATGCTCA CCGGCGACAA CCAGCACGTG GCGCAGGCCA TCGCCCGAGA AGTGGGCATT
GACGAAGCGC GCGGCAATCT GTTGCCGGAA GATAAGCTGT CGCAAATCGA ACGGCTCTCA
GCGCAGGGCG TAACCGGTAT GGTGGGTGAC GGTATCAACG ACACCCCGGC GCTGGCTCGC
GCAGACATCG GTTTCGCCAT GGGCGCGATG GGTGCCGACA GCGCGATTGA AACCGCCGAC
GTGGCGTTAA TGAATGACGA TCTGCGCAAG ATCCCGGAAT TCGTGCGTAT TTCCAAATCG
ACCCGCATCA TATTAATCCA GAACATTGCA TTGGCGCTTG GCATCAAAGC CCTGTTTCTG
GCGCTCACCT TGCTGGGGCT GGGCACGATG TGGATGGCGG TGTTCGCCGA CGTGGGCGCC
AGCCTGCTGG TAGTGGGCAA CGGGTTGCGC TTGCTGCGCC TGTCGCCGGT TGCCGCGCAT
CAGCCGCACT CTGCGTAA
|
|---|
| Protein sequence | MSEKHSSTSA RQFHPVAQGK PGKALFRPQP QAHAVPEQAP HRHEQAPKDQ SCAHHCCDKA
TPTVPVSALA AAERTGDQQR TPIRIMQMDC PTEETLLRKK LDTLPEVSAL EFNLMQRVMT
VTHHYDGLDK VLAAIRSLGF EPEIRTGNAR EPLPPEPKKS WWPLGLAVVA AGAAEAVEWS
ALPEWWAAVL AILAVASSGL TTYRKGWIAL RTGNLNINAL MSIAVTGALF LQQWPEAAMV
MVLFTLAEHI EARSLDRARN AIAGLMNLAP DTATVQQPDG SWRDQEANTV TPGSIVRVRP
GERIALDGDI TRGHSAVNQA PITGESLPVD KRVGDSVFAG TINESGSFEY RVTAAAANTT
LARIIHAVEQ AQGTKAPTQR FVDQFARVYT PLVFLGALLV AVLPPLFTGG SWLEWTYKAL
VLLVIACPCA LVISTPVTIV SGLAAAARRG ILIKGGVFLE KGHALSWLAL DKTGTLTHGK
PVQTGFEAVA DLDEAHCRQL AASLAGRSDH PVSQAVARAA QDAGTPLIDV DNFSAVAGQG
VIGTLQGQRY FLGNLRLARE RLGETAEGIV GRLTTLEQAG NTTIILGDEQ RVLALMAVAD
TVKPSSQEAI NALHQAGIKT LMLTGDNQHV AQAIAREVGI DEARGNLLPE DKLSQIERLS
AQGVTGMVGD GINDTPALAR ADIGFAMGAM GADSAIETAD VALMNDDLRK IPEFVRISKS
TRIILIQNIA LALGIKALFL ALTLLGLGTM WMAVFADVGA SLLVVGNGLR LLRLSPVAAH
QPHSA
|
|---|
| |