Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3511 |
Symbol | |
ID | 8117980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3990081 |
End bp | 3991490 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644853887 |
Product | glucuronate isomerase |
Protein accession | YP_003005801 |
Protein GI | 251791080 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1904] Glucuronate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCAGT TTTTAAGTGA AGATTTTTTG TTGGATACTG AGTTTGCCCG TCGGCTGTAC CATGAATTTG CAGCAGATCA GCCGATTTTT GATTATCACT GCCATTTGCC GCCTGCGCAG ATTGCCGAAA ATTATCGTTT TAAAAATCTG TATGACATCT GGTTGAAGGG CGACCATTAC AAATGGCGTG CCATGCGCAC TAACGGCGTA CCGGAGCGTT TCTGTACCGG CGATGCCGGC GACTGGGAGA AATTCGAGGC CTGGGCCGCC ACCGTACCGC ATACCATCGG CAACCCGCTG TATCACTGGA CGCATCTGGA GCTACGCCGC CCGTTCGGCA TCACCGGCAC CCTGCTGTCG CCGTCTACCG CTAAAGACAT CTGGAACCGT GCCAATGCCC TGCTGGAGCG TGACGAGTTT ACCGCGCGCG GCATCATGCA GCAGATGAAC GTGAAAATGG TCGGCACCAC CGATGATCCG ATCGACGACC TGTTGCACCA CAAAGCGGTT GCCCAGGATA AAACCTTCTC TATCAAAGTG CTGCCGAGCT GGCGCCCGGA TAAAGCCTTT AATATCGAAC TGGCGACCTT TAACGATTAC ATGGCGAAGC TCGGTGAAGT CTCCGATACC GATATTCGCC GTTTCAGCGA TCTGCAGGCT GCGCTGACCA AACGTTTGGA CCACTTTGCC GCGCACGGCT GTAAAGTGTC CGACCACGCG CTGGACGTCG TACTGTATGC CGATGCGGAT GAAGCCACGC TGGATGGCAT TCTGGCTCGC CGCCTGTCCG GCGCGACCTT GAGCGAACAC GAAGTGGCGC AGTTCAAAAC TGCGGTACTG GTGTGGCTGG GCGCTGAATA CGCGCGCCGC GGCTGGGTGC AGCAGTATCA CATCGGCGCG TTGCGTAACA ACAACCTGCG TCAGTTCAAC CTGCTGGGGC CGGATGTGGG TTTTGATTCC ATCAACGACC GCCCGCTGGC GCAAGAACTG TCCCGCCTGC TCAGTAAGCA GAATGAAGAA AATCTGCTGC CGAAAACCAT CCTGTACTGC CTGAATCCGC GTGATAACGA AGTGCTGGGC ACCATGATCG GTAACTTCCA GGGTGAAGGG ATGCCGGGCA AGATGCAGTT CGGCTCCGGC TGGTGGTTCA ACGACCAGAA AGACGGTATG CAACGTCAGA TGACGCAACT GGCGCAGTTG GGCCTGTTGA GCCGCTTCGT CGGTATGTTG ACCGACAGCC GCAGCTTCCT GTCTTACACC CGTCATGAAT ATTTCCGTCG CATCCTGTGC CAGATGATCG GCCGTTGGGT GGAAGACGGC GAAGCGCCGG GCGACCTGCC GTTGCTGGGC GAGATGGTGA AAAATATCTG TTTCGATAAC GCCAAAAACT ATTTCGGTAT CGAGTTATAA
|
Protein sequence | MPQFLSEDFL LDTEFARRLY HEFAADQPIF DYHCHLPPAQ IAENYRFKNL YDIWLKGDHY KWRAMRTNGV PERFCTGDAG DWEKFEAWAA TVPHTIGNPL YHWTHLELRR PFGITGTLLS PSTAKDIWNR ANALLERDEF TARGIMQQMN VKMVGTTDDP IDDLLHHKAV AQDKTFSIKV LPSWRPDKAF NIELATFNDY MAKLGEVSDT DIRRFSDLQA ALTKRLDHFA AHGCKVSDHA LDVVLYADAD EATLDGILAR RLSGATLSEH EVAQFKTAVL VWLGAEYARR GWVQQYHIGA LRNNNLRQFN LLGPDVGFDS INDRPLAQEL SRLLSKQNEE NLLPKTILYC LNPRDNEVLG TMIGNFQGEG MPGKMQFGSG WWFNDQKDGM QRQMTQLAQL GLLSRFVGML TDSRSFLSYT RHEYFRRILC QMIGRWVEDG EAPGDLPLLG EMVKNICFDN AKNYFGIEL
|
| |