Gene Dd1591_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3488 
SymboldnaG 
ID8117956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3959307 
End bp3961061 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content52% 
IMG OID644853863 
ProductDNA primase 
Protein accessionYP_003005778 
Protein GI251791057 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00314359 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGAC GTATTCCCCG CGTATTTATT AATGACCTGC TAGCCCGTAC CGACATCGTT 
GACCTGATCG ATGCGCGCGT AAAATTAAAA AAGCAGGGCA AAAATTACCA CGCGTGTTGC
CCGTTCCACC ACGAGAAGAC CCCTTCGTTC ACCGTTAACG GTGACAAGCA GTTTTACCAT
TGCTTTGGTT GCGGCGCCCA CGGCAACGCA ATTGATTTCC TGATGAATTA TGATCGCCTG
GAATTCGTTG AGAGCATTGA AGAACTGGCT GCAATGCACG GACTGGATGT TCCTTACGAA
GCCGGCACCG GTCCGACTCA GCTCGAACGC CACCAGCGGC AAAGTTTATA CGAGCTGATG
GAACAATTAA GCGCTTTTTA CCAACATACC TTGAAGCAAC CCGCAGGCGC TCCTGCCAGA
GAGTATCTGG CCAGACGTGG TCTGAGTGAT GAAATCATCC AACAGTTCGC CATCGGATGT
ACATTGCCTG GGTGGGATAA TGTATTAAAG CGTTTCGGTC GCAGCGGCGA AAACCAAACC
ACGCTGACCG ATGCCGGCAT GTTGGTGACG AATGAGAATG GTCGTACCTA TGATCGTTTT
CGCGACCGGG TCATGTTCCC CATCCGCGAT AAGCGCGGGC GGGTGATTGC GTTCGGTGGT
CGGGTCATGG GTGACGGCAC CCCAAAGTAC CTGAACTCGC CGGAAACCGA GATTTTTCAT
AAAGGTCGGC AATTATACGG CCTGTACGAA GCGCAACAGA AAAATCCGGA ATTGAAGCGA
CTGCTGGTAG TCGAAGGGTA TATGGATGTG GTGGCGCTGG CTCAGTTCGG CATCAATTAC
GCTGTCGCAT CGCTGGGAAC ATCAACAACG GCGGATCATA TTCAGTTGCT GTTCCGCGCC
ACCGATCAGG TGGTGTGCTG TTACGACGGT GACCGTGCCG GACGTGATGC GGCCTGGCGC
GCGCTGGAAA CCGCGCTACC CTATCTTGAT GACGGCAGGC AACTGCGTTT TATGTTCCTG
CCTGATGGCG AAGACCCGGA TACGCTGGTT CGTCAGGAAG GTAAAGCGGC TTTCGAGCAA
CGAATCGAGC AGGCGATGCC GTTATCAGCC TTTTTATTCG ATTCGCTGTT ACAACAGGTA
GATATGAGTA CCCCGGATGG GCGCACCAAG CTGAGCACGC TGGCGTTACC CCTTATTGGT
CAAGTCCCGG GCGAAACGTT GCGCTTATAC TTACGTCAAC AACTCGGCCA TAAGCTGGGG
CTGTTGGATG ACAGCCAGTT GGATCGTTTG TTACCGAAGA CAGCGGAACA AACATCGCAT
TACCAGCCGC CGCGGCTAAA AGTCACAACT ATGCGTATAC TGATAGGACT TTTAGTACAA
AATCCGAGGC TATCCGCCGA GGTGCCGGAG CTGGCGCTGG ACGATGTGGA AGAGAACAAA
ATTGCAGGGC TGGAGCTTTT TTTAACGCTG GTAAAAACCT GCAATGAAAG CCCAGGCATG
AACATGGGAC TGCTGCTGGA GAAATATCGC GAAAGTAAAT ATCGCAAGCA GCTTGAAACC
CTGGCCGCCT GGGACCATAT GATTGAAGAA GAAGAGCTCG AAGAAAAATT TCGCATCAGC
CTGGCAGAGC TCTATGACCA GTTGCTACAG CAACGGATGG ATACGCTCAT TGCTCGTGAA
AGAACACATG GGCTGAGCAT GAATGAGCGC AAAGAGTTGT GGTCGCTGCA ACTGGCGCTG
ACACGAAAAA ACTGA
 
Protein sequence
MAGRIPRVFI NDLLARTDIV DLIDARVKLK KQGKNYHACC PFHHEKTPSF TVNGDKQFYH 
CFGCGAHGNA IDFLMNYDRL EFVESIEELA AMHGLDVPYE AGTGPTQLER HQRQSLYELM
EQLSAFYQHT LKQPAGAPAR EYLARRGLSD EIIQQFAIGC TLPGWDNVLK RFGRSGENQT
TLTDAGMLVT NENGRTYDRF RDRVMFPIRD KRGRVIAFGG RVMGDGTPKY LNSPETEIFH
KGRQLYGLYE AQQKNPELKR LLVVEGYMDV VALAQFGINY AVASLGTSTT ADHIQLLFRA
TDQVVCCYDG DRAGRDAAWR ALETALPYLD DGRQLRFMFL PDGEDPDTLV RQEGKAAFEQ
RIEQAMPLSA FLFDSLLQQV DMSTPDGRTK LSTLALPLIG QVPGETLRLY LRQQLGHKLG
LLDDSQLDRL LPKTAEQTSH YQPPRLKVTT MRILIGLLVQ NPRLSAEVPE LALDDVEENK
IAGLELFLTL VKTCNESPGM NMGLLLEKYR ESKYRKQLET LAAWDHMIEE EELEEKFRIS
LAELYDQLLQ QRMDTLIARE RTHGLSMNER KELWSLQLAL TRKN