Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3466 |
Symbol | nusA |
ID | 8117932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3939088 |
End bp | 3940578 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644853840 |
Product | transcription elongation factor NusA |
Protein accession | YP_003005757 |
Protein GI | 251791036 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG AGATTCTGGC TGTTGTTGAA GCGGTTTCCA ATGAAAAGGC CGTGCCGCGC GAAAAGATTT TTGAAGCGCT TGAAACTGCA CTGGCGACAG CGACCAAGAA AAAATACGAG CAGGAAATCG ATGTTCGTGT TTGCATCGAC CGTAAAACCG GTGATTTCGA TACCTTCCGC CGTTGGCAGG TTGTCAACGA AGTGACCCAG CCAACACGTG AAATCACGCT GGAAGCGGCG CAGTTCGAAG AACCGAGTAT TGATCTGGGC GGTTACATCG AAGATCAGAT AGAATCCGTG ACTTTCGACC GCATTACCAC GCAAACTGCC AAGCAGGTTA TCGTGCAGAA AGTGCGCGAA GCCGAGCGTG CGATGGTGGT TGATCAATTC CGTGAACAGG AAGGTGAAAT CGTTACCGGC GTCGTTAAGA AAGTTAACCG CGATAACATC ACCCTGGACT TGGGCAGCAA TGCCGAAGCG GTGATCGGCC GTGAAGATAT GCTGCCGCGT GAGAATTTCC GCCCAGGCGA CCGTATTCGC GGCGTGCTGT ACGCGGTGCG TCCGGAAGCG CGCGGCGCAC AGTTGTTTGT GAGCCGTTCC CGCCCTGAAA TGCTGATTGA ACTGTTTCGC ATCGAAGTGC CGGAAATCGG TGAAGAAGTC ATTGAGATCA AAGCCGCTGC CCGCGATCCG GGTTCCCGCG CTAAAATTGC GGTTAAAACC AACGATAAGC GTATCGACCC GGTGGGTGCA TGTGTAGGGA TGCGCGGCGC GCGCGTTCAG GCGGTATCCA GCGAGCTGGG CGGCGAGCGT ATCGACATCG TCCTGTGGGA TGATAATCCG GCACAGTTCG TGATTAATGC CATGGCTCCG GCTGATGTGG CATCCATCGT GGTCGATGAA GACAAACACA CCATGGATAT CGCGGTTGAG GCCGGTAATC TGGCTCAGGC CATCGGCCGT AATGGTCAGA ACGTGCGTCT GGCTTCCCAA CTGAGCGGCT GGGAACTGAA CGTGATGACC ATTGAGGACT TGCAGGCTAA GCATCAGGCT GAAGCCCATG CTGCCATCGA TATTTTCACC AAACATCTGG ACATTGACGA AGAATTCGCC ACAGCACTGG TTGAAGAAGG CTTCTCTTCA TTGGAAGAGT TGGCTTATGT GCCCATCAAT GAGTTGCAGG AGATCGATGG GTTGGATGAA GAAACCATCG AAGCGTTGCG CGAGCGCGCA AAAGCAGCGC TGACGACGCT GGCGCTGGCT AACGAAGAGA ACCGTGGCAA CGGTCAGCCG GCAGAAGATT TGCTCAATTT ATCTGGTCTG TCTCGTGAGC TGGCGTTTAA ACTAGCAGCT CGCGGTGTTT GCACGCTGGA AGATCTTGCT GAGCAGGGCG TCGATGACCT GGCAGATATC GAAGGGCTTG ATGAAGAACA AGCCGGTGAG CTGATTATGG CTGCGCGTAA TATCTGTTGG TTTGGTGGCA GTAACGAATA A
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Protein sequence | MNKEILAVVE AVSNEKAVPR EKIFEALETA LATATKKKYE QEIDVRVCID RKTGDFDTFR RWQVVNEVTQ PTREITLEAA QFEEPSIDLG GYIEDQIESV TFDRITTQTA KQVIVQKVRE AERAMVVDQF REQEGEIVTG VVKKVNRDNI TLDLGSNAEA VIGREDMLPR ENFRPGDRIR GVLYAVRPEA RGAQLFVSRS RPEMLIELFR IEVPEIGEEV IEIKAAARDP GSRAKIAVKT NDKRIDPVGA CVGMRGARVQ AVSSELGGER IDIVLWDDNP AQFVINAMAP ADVASIVVDE DKHTMDIAVE AGNLAQAIGR NGQNVRLASQ LSGWELNVMT IEDLQAKHQA EAHAAIDIFT KHLDIDEEFA TALVEEGFSS LEELAYVPIN ELQEIDGLDE ETIEALRERA KAALTTLALA NEENRGNGQP AEDLLNLSGL SRELAFKLAA RGVCTLEDLA EQGVDDLADI EGLDEEQAGE LIMAARNICW FGGSNE
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