Gene Dd1591_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3450 
Symbol 
ID8117916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3920388 
End bp3921611 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content60% 
IMG OID644853824 
Productphosphopentomutase 
Protein accessionYP_003005741 
Protein GI251791020 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1015] Phosphopentomutase 
TIGRFAM ID[TIGR01696] phosphopentomutase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTG CATTTATTAT GGTTCTCGAC TCGTTCGGGA TTGGCAGCGC CGCCGATGCC 
GAACGGTTTG GCGACGCAGG TTCAGATACG CTGGGCCATA TCGCACAAGC CTGCGCACAA
GGCAAGGCGG ATATCGGCCG ACAAGGGCCG CTACACTTGC CGAACCTGAG CCGTCTGGGG
CTGGGCAAAG CGGCCGAAGG TTCCACCGGT TGCTTTCCGC CGGGGCTGGA CGCGCAGGCG
GAGATCATCG GCGCGTACGC GTACGCCAGC GAAATTTCTT CCGGCAAGGA TACGCCGTCC
GGCCACTGGG AAATCGGCGG TGTGCCGGTG CTGTTCGACT GGGGCTATTT CCACGACGAA
CACAATAGCT TCCCGCAGGC GCTGCTGGAC CGGCTGGTCG AACGCGCCGG GCTGCCGGGC
TATCTCGGCA ATTGTCATTC CTCCGGTACG GTGATCCTCG ACCAGCTCGG TGAGGAGCAC
ATGAAAACCG GCAAGCCGAT TTTCTATACC TCGGCGGATT CGGTATTCCA GATCGCCTGC
CACGAAGAGA CGTTCGGGCT GGAGAAGCTG TACGAACTGT GTGAAATCGC CCGTGAGGAA
CTGACCGAAG GCGGTTACAA CATTGGGCGG GTGATCGCCC GGCCGTTCGT CGGTGATAAA
GCCGGCCAGT TCCAGCGTAC CGGTAACCGC CACGATCTGG CGGTGGAGCC GCCGGCACCA
ACTATGCTGA AAAAGCTGGT GGACGAAAAG GGCGGCAATG TGGTGTCGGT GGGGAAAATC
GCCGATATCT ACGCCAACGT CGGCATCACC AAAAAAGTGA AAGCCACCGG TATCGATGCG
CTGTTTGACG CCACGCTGAA AGAGATGGAG CAGGCAGGCG ACGACACCAT CGTGTTCACC
AATTTTGTCG ATTTCGACTC GTCCTACGGC CATCGCCGTG ATATTGCCGG TTATGCCGCC
GCGCTGGAGC TGTTTGACCG CCGCCTGCCG GAGATGCTGG CGCGGGTGAC GGGCGATGAC
ATCCTGATTC TGACCGCCGA CCACGGTTGC GACCCAAGCT GGCCGGGCAC CGATCACACC
CGCGAACACG TGCCGGTGCT GATTTACGGG CCGAACGTTA AGCCGGGCGA TTACGGCCAC
CGCACCACCT TTGCCGATAT CGGCCAGACG GTTGCTCATT ATTTCGGCCT GTCGCCGATG
GATTACGGTA CGCCGCTGTT TTAA
 
Protein sequence
MKRAFIMVLD SFGIGSAADA ERFGDAGSDT LGHIAQACAQ GKADIGRQGP LHLPNLSRLG 
LGKAAEGSTG CFPPGLDAQA EIIGAYAYAS EISSGKDTPS GHWEIGGVPV LFDWGYFHDE
HNSFPQALLD RLVERAGLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC
HEETFGLEKL YELCEIAREE LTEGGYNIGR VIARPFVGDK AGQFQRTGNR HDLAVEPPAP
TMLKKLVDEK GGNVVSVGKI ADIYANVGIT KKVKATGIDA LFDATLKEME QAGDDTIVFT
NFVDFDSSYG HRRDIAGYAA ALELFDRRLP EMLARVTGDD ILILTADHGC DPSWPGTDHT
REHVPVLIYG PNVKPGDYGH RTTFADIGQT VAHYFGLSPM DYGTPLF