| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3380 |
|---|
| Symbol | |
|---|
| ID | 8119916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3848924 |
|---|
| End bp | 3849844 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644853754 |
|---|
| Product | lipid A biosynthesis palmitoleoyl acyltransferase |
|---|
| Protein accession | YP_003005675 |
|---|
| Protein GI | 251790954 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000254848 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC AAACCTTTAC CTGGGACTTG TGCCATCCCC GTTACTGGCT GCTGTGGTTC
GGCCTTGCCG TACTATTTCT GCTGGTGCAG TTGCCTTATC CGATGCTGAT GCGGCTGGGT
GACTGGCTGG GGCGCCACTC CCGTTATTTT CTCAAACGAC GGGTGAGCAT TGCTCGTCGT
AATCTGGAAC TGTGCTTTCC TGAGATGCCG GTATCGCAGC GTGAAGCGCT GGTGGATGCG
AATTTCGCGT CGCTGGGAAT GGCGTTGATG GAAACCGGCA TGGCCTGGTT TTGGTCGGAT
CGGCGGGTCA GAGCCTGGTT CGATGTTTCC GGCTTTGAGC ATCTGCAGCA GGCAGGGCGC
GAACAACGCG GCGTGATGGT GATCGGCATT CATTTTATGT CGCTGGAGCT GGGCGGCCGT
GCGATGGGGC TATGCCAGCC GATGATGGCG ATGTACCGGC GGCATAACAA TAAAGTGATG
GAGCTGGTGC AAACCTGGGG ACGCTCTCGC TCTAATAAGG CGATGATCGA TCGCAAAGAT
TTGCGCGGTA TGGTGCAGGC GCTGAAGAGC GGCGAAGCGG TATGGTTCGC GCCGGATCAG
GATTACGGCC CTAAAGGCAG TGTATTTGCA CCGTTCTTTG CGGTGGAACA GGCGGCGACG
ACCAGCGGAA CGTTCACTAT TCACCGTTTA GCCAAACCGG CGATGATTAC CACGGTGCTG
ATTCGTAAAC CGAACCGGCA GGGATATCAA CTGGTGATTG AACCGGAACT GGAAGACTAT
CCATACCAGG ATCAACAACA GGCGGCGCAG TACATGAATC GGGTGATTGA GCGGGAGATT
TTGCGCGCAC CGGAACAATA TCTGTGGCTG CACCGTCGTT TTAAGACGCG CCCGTGCGGT
GAAGCATCGT TGTACCGCTA A
|
|---|
| Protein sequence | MTQQTFTWDL CHPRYWLLWF GLAVLFLLVQ LPYPMLMRLG DWLGRHSRYF LKRRVSIARR
NLELCFPEMP VSQREALVDA NFASLGMALM ETGMAWFWSD RRVRAWFDVS GFEHLQQAGR
EQRGVMVIGI HFMSLELGGR AMGLCQPMMA MYRRHNNKVM ELVQTWGRSR SNKAMIDRKD
LRGMVQALKS GEAVWFAPDQ DYGPKGSVFA PFFAVEQAAT TSGTFTIHRL AKPAMITTVL
IRKPNRQGYQ LVIEPELEDY PYQDQQQAAQ YMNRVIEREI LRAPEQYLWL HRRFKTRPCG
EASLYR
|
|---|
| |