Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3324 |
Symbol | |
ID | 8119060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3781814 |
End bp | 3782635 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644853700 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003005621 |
Protein GI | 251790900 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.180623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAAAA TTTGGTTTAT TACCGGTGCC TCTCGCGGTT TCGGCCGTCG CTTTGTTGAA GCGGCATTGC AGCGTGGCGA TAACGTCGCC GCCACCGCAC GCACTACCGA TTCATTGGCC GATCTGGTTG CGGCTTATGG CAGCGCGATT TTACCGTTAT CGCTGGATGT GACCGATAAG TCGGCCGTAA CCGACGCTAT CAGTCAGGCG CACGCGCACT TCGGGCGGTT GGATGTCGTC GTCAACAATG CCGGTTACGG CGTTTTCGGC ATGATTGAAG AGATGAGCGA GCAAGAGGTA CGCACCCAAT TCGAGACCAA TGTGCTGGGT ACGCTGTGGG TGACGCAGGC AGCGCTGCCC TACCTGCGTG CTCAAGGCAG CGGCCATATC ATCATGTTAT CCAGCCTGCT CGGCCTCGCC TCCTTCCCGA CAACCGGCAT CTACAGCGCG TCTAAAGCGT CCGTCGAAGC CTTTGCCGAC GCGTTATCCC AGGAGGTCGC CGCCTTCGGC ATTAACGTAA CGATTGTCGA ACCCGGCCCG TTCAGCACCG ACTTTTCCGC ATCCGCGGTG TATGCCTCAC CGCTGGAATC TTACAGCGGT GTGCGTGATG CGTTTAACGC CAGTTTCTCC GCTATGCCGA TCGCCGATCC CGATATCGTC GGCCCGGCGC TGCTGAAAGT GGTCGATGCC GACGACCCGC CGCTGCGGAT CTTCTTTGGC CCACTTGCCA GCCAGGTTAT TCCGTATGTC TATGCCGAGC GGCTCAAGAC ATGGGAAGCC TGGGGCGATG TCGGCACCGG TGCCGATACC CAGCACAGCT AA
|
Protein sequence | MRKIWFITGA SRGFGRRFVE AALQRGDNVA ATARTTDSLA DLVAAYGSAI LPLSLDVTDK SAVTDAISQA HAHFGRLDVV VNNAGYGVFG MIEEMSEQEV RTQFETNVLG TLWVTQAALP YLRAQGSGHI IMLSSLLGLA SFPTTGIYSA SKASVEAFAD ALSQEVAAFG INVTIVEPGP FSTDFSASAV YASPLESYSG VRDAFNASFS AMPIADPDIV GPALLKVVDA DDPPLRIFFG PLASQVIPYV YAERLKTWEA WGDVGTGADT QHS
|
| |