Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3315 |
Symbol | |
ID | 8119051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3768180 |
End bp | 3770270 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644853691 |
Product | general secretion pathway protein D |
Protein accession | YP_003005612 |
Protein GI | 251790891 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACA TTTTTAGGGC AAACGTACTG TTTTTAATTT TTATGATATC GCAACGTGTT TATGCTGAAA AGGCGATGAC GACTGATGAT GTTCATTCTT TAGCTGCCAC AACGGCTGCG AACACATCAA ATAAATACTC CGCCTCATTT CGTGAAGTGG AAATAAAGGA GTTTGTTGCG ACTGCGGCGC AAGTTTTAAA GAAAAATATT ATTATTGATC CGTCAGTGAC CGGGCAGATT TCTGTACGTA GTTATGATGA TTTGGATGAA ACTCAATATT TTGTTTTCTT CCTTAACGTA ATGGAAACCT ATGGCTACAG CGTGGTTCAA ATTGATAACC ACACTCTGAA TATTGTCCCT TTGGCGCAAT CCTTACGGGC AGCCTGGACT GAAGGCAACA CCGGGCGAGA AAAAAATATT GTGGTGCGTT TGGCAAAAAT GGATGCGTTG CCTGGCTCGG AACTGGAGCC TATTTTAAGT CGCATATCGG AAGACGTTGC GGTGAAACTG AAATATTACT CACCAGGGAA CTTGTTTATC TTCACCGGGC GCGAGGATGT AGTTAAACGA CTGGTGGACA TTGTGAATCA GGTTGACAAT GCCAGAAAAG ATAACAGTCC GGCGGTATTT AACGTGAGCC GGGCAAAAGC GTCGGATATT GCTAAATCTT TGCAGAGTGC CTTCAAAAAC CTCAGCCCGG AAGATAAAGA TGCGCCGTTA ATTTACGGCA ACGACGCGAC CAGGACCATT GTGGTCAAAG GCAGCGCGCA CGTGAAGACG GAGATCAGAC GGTTAATTTC AACTATGGAC GTGCCCGATC AGCAATCCCG AGTGTTTTTT TTAAAGTATG CCGATGCGGC GCAGATGGCG AAACTGTTCA CCAATAACCA GTCAGGAAGT TCTGAGCCGG GCTTGTTGCC GATGGCGGGC GATAGCGGCA TGTCGATGGA CGCGCAACTG GCGCAGCAGC AGCCAGGCGG CATGAGCTCT GGGCAGCCCG TCAACCCGGA CGGTCAGGCA GCCGGCAACG GCACCGCACC TGTATCCGGC GCCGGTTTTT CGAACGACCT CGGCAGCCTG TTCGGCGGTG GTGATGCGCT GGTGAGGCAA ATTCGCGTCC ATGCCGATCG CGATAACAAT GCACTGATCG TCAGCGCGCC GCCCGACGCC ATGCGTCAGG CGGCGTCAAT TATACGGCAG CTTGACGTTC GGCATGAGCA GGTGCTGGTT GAAGCGATTG TGGTGGAAGT ACAGCAAGCC GAAGGCTTGA ATCTCGGTAT CGCCTGGGGA AATAGAAATT ATGGCGGCAG CAACTTCAAT AGCGTTAACG TCGGGAATGG GTTCAATCAG CCCAATCCGT TAGTCAATGC GTTAAAAGGG ACAGAAGGGC TGGTTGCCGG TTTTTATCAT GGCAACTGGG GAACATTGTT TAACGCGCTC GAAAGTAATA AGCGTAATAA TATTCTCGCA ACGCCCAGCG TCGTTACCCT CGACAATCAC CGCGCAGAAT TTAACGTCGG CCAGGACGTA CCTATTTTAA CCGGCTCGCA AACCACCAAT AACGATAATA TTTTTAATAC GGTCCAGCGG CGCACAATTG GCATTAAGTT CAGTATCCTG CCCCGCATCA ATCAGAGTGG AACCATCCTC TTAAATATTT CGCAGGAAAT TTCCAGCTTG TCCGACACCG CGCAGGTAAA TAGTAATCTT GGCTCGGTGT TTAATATTCG TACGGTAAAT AACGTAGTAC AGGTTCAGGA TGACGAAACC GTCGTGATTG GCGGGTTATT GGATGACGAA AAAAAAGAGA CCACTAACAA GGTTCCTCTG CTGGGTGATA TTCCCTGGCT GGGCAACTTA TTCAGGTATA CCTCGCAGAA TAATGACAAA CGTAATCTGA TGCTGTTTAT CCGCCCGCGA ATTATTCGTG GCAACGGGGT TGAGGCCGCG CAGGCAAGGC GAGGCGCGTC TTCCTCTGTG GCTGATGAGG CGGTGCGGAA TTTCTCCGAG TCGCAGGCGA CCGAGGGCCC GAATGCCGGA GTGAACGCTA TTCTGAACGG CATTCAGAAA TTCACGGCGA GTTTGCGCTG A
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Protein sequence | MNNIFRANVL FLIFMISQRV YAEKAMTTDD VHSLAATTAA NTSNKYSASF REVEIKEFVA TAAQVLKKNI IIDPSVTGQI SVRSYDDLDE TQYFVFFLNV METYGYSVVQ IDNHTLNIVP LAQSLRAAWT EGNTGREKNI VVRLAKMDAL PGSELEPILS RISEDVAVKL KYYSPGNLFI FTGREDVVKR LVDIVNQVDN ARKDNSPAVF NVSRAKASDI AKSLQSAFKN LSPEDKDAPL IYGNDATRTI VVKGSAHVKT EIRRLISTMD VPDQQSRVFF LKYADAAQMA KLFTNNQSGS SEPGLLPMAG DSGMSMDAQL AQQQPGGMSS GQPVNPDGQA AGNGTAPVSG AGFSNDLGSL FGGGDALVRQ IRVHADRDNN ALIVSAPPDA MRQAASIIRQ LDVRHEQVLV EAIVVEVQQA EGLNLGIAWG NRNYGGSNFN SVNVGNGFNQ PNPLVNALKG TEGLVAGFYH GNWGTLFNAL ESNKRNNILA TPSVVTLDNH RAEFNVGQDV PILTGSQTTN NDNIFNTVQR RTIGIKFSIL PRINQSGTIL LNISQEISSL SDTAQVNSNL GSVFNIRTVN NVVQVQDDET VVIGGLLDDE KKETTNKVPL LGDIPWLGNL FRYTSQNNDK RNLMLFIRPR IIRGNGVEAA QARRGASSSV ADEAVRNFSE SQATEGPNAG VNAILNGIQK FTASLR
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