Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3314 |
Symbol | |
ID | 8119050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3766705 |
End bp | 3768180 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644853690 |
Product | type II secretion system protein E |
Protein accession | YP_003005611 |
Protein GI | 251790890 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCCAA AGGTCTCTAG CCTGGCGTGG GCGAAAAGCC AGGGCATTTT AATTGAGAGG CAAGATGACG CCTGGCGGAT TTATTACCGT AGCGATGCCC ACCCGCAGGC GATTATGAGT GCGTTGCGCT ATTGCCCGCC GGGCGCGTTA CTCAGCGCCA TAGACGATGA CGCCTTCGCG GAGCGCATCG CCAGCACGTT TCAGAATAGC GATCAGCGGG CGAGTGAGGT TATGGCCGGG CTGAGCGAAG ATCTGGATAT GTACCAGTTA GCCGAGGCGC TGCCGGTGTA CGAAGAGATT CTTAATAACG AAGATAATCC GCCTATCGTT AAGCTGATTA ACGCGATTCT TGCGCAGGCG CTGAAGGAGC ACGCCTCCGA TGTCCATATT GAAACGTTTG AGCAGCGGGT CGCCATCCGT TTTCGCCTTG ATGGCGTACT GCACAAAAAG CTTGAGCCGG AACGGCGCCT CTCTTCGTTG CTGGTTTCGC GGCTAAAGAT TATGTCCCGC CTGGATATTG CAGAAAAACG CAAACCGCAG GATGGGCGCA TGAGTTTACG CATATTGGGC CGGGCCGTAG ATGTCAGGGT GTCGGTATTA CCCTCCAGTT ATGGCGAAAG GATTGTGCTG CGCTTGCTGG ATAAAAACGC CGTTAAACTG GATTTACGTC AGCTCGGCAT ACCTGATGCG GTGAGAAAAA AGGTGGTGTC GTTAGTGAGC CGGCCGAATG GCATTATTCT GGTCACGGGG CCGACCGGGT CGGGTAAAAG CTCAACGCTG TATGCGATGA TCAACGAACT GGATCAAGAA AAGCTGAACA TCATGACCAT CGAAGATCCG GTCGAATATG ACATCGCCAA TATCTCGCAG ACTCAGGTTA ACGGCAAAAT TGGTATGACG TTCGCGAAAG GGTTGCGGGC TATTTTGCGT CAAGACCCTG ACGTGATTTT AATCGGCGAA ATTCGCGATC AGGAAACGGC GCAGATAGCG GTACAGGCAT CGATGACCGG CCATCTGGTG TTGTCTACGC TACATACCAA CACCGCCATC AGCGCACTTA CCCGCTTGCA GGATATGGGC GTAGAGCCTT TTATGCTGGC CAGTGCGCTG AATGCCGTCA TGGCGCAACG ACTGGTGAGG TGCTTGTGCG TTCACTGCCG TCAGCCCGTA GCCATCACGG AGGCGGAATG CCAGATGCTC AGCGTGCCCT GGCGGGAGGG CATGACGGGA TATCGGGCAC AGGGCTGCCC GGCCTGTTTT AATACCGGCT ATCTCGGGCG TACGCTGATT CAGACGCTGG TGGTCATTAA TGAACCGATG CGTGTCGGGA TCTATCAGCA AAAAAATGAG AGTGAGTTGG CGGCGCTGGC TGGAAATGCG GCTTCACTCA GCCTGGATGG GGTCAATAAA GTCCTGGCTG GTTTAACCTC GCTTGATGAG GTCATCCGGG TTACAGGTGA GCTTGATGAT GCGTAA
|
Protein sequence | MHPKVSSLAW AKSQGILIER QDDAWRIYYR SDAHPQAIMS ALRYCPPGAL LSAIDDDAFA ERIASTFQNS DQRASEVMAG LSEDLDMYQL AEALPVYEEI LNNEDNPPIV KLINAILAQA LKEHASDVHI ETFEQRVAIR FRLDGVLHKK LEPERRLSSL LVSRLKIMSR LDIAEKRKPQ DGRMSLRILG RAVDVRVSVL PSSYGERIVL RLLDKNAVKL DLRQLGIPDA VRKKVVSLVS RPNGIILVTG PTGSGKSSTL YAMINELDQE KLNIMTIEDP VEYDIANISQ TQVNGKIGMT FAKGLRAILR QDPDVILIGE IRDQETAQIA VQASMTGHLV LSTLHTNTAI SALTRLQDMG VEPFMLASAL NAVMAQRLVR CLCVHCRQPV AITEAECQML SVPWREGMTG YRAQGCPACF NTGYLGRTLI QTLVVINEPM RVGIYQQKNE SELAALAGNA ASLSLDGVNK VLAGLTSLDE VIRVTGELDD A
|
| |