| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3248 |
|---|
| Symbol | |
|---|
| ID | 8120876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3695672 |
|---|
| End bp | 3696370 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644853626 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_003005547 |
|---|
| Protein GI | 251790826 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATT ACACCCGACG CCGTTTTATC GCCATTATGG GCAGCGCGCT GGCCGTTTCC
GGCAGTGGTT TGCCGGCCGC CGCGCAGGAC ACCACGGCGC CTTCCGTCGG CCCGCGCCCC
GTCAAATACG GCATACTGCA CAACGAGCTG CGCTGCATCG GCTGCAAAGC CTGTATGACC
GCCTGCCGTA AAACCAACCA GGTGCCGGAG GGCGTCACCC GGCTGGATAT CATACAAACC
GTCGATATCC CCGCCACCGA CACCAGTAAA CCCATCAAAC AGTTCTTTCG TCAGTCTTGT
CAGCACTGCG ATAACCCGCC CTGTGTGTCC GTTTGCCCGA CCGGCGCGTC GTTCAAAGAC
GCACTGACCG GCATTGTCGA CGTCAACGAT AAACGCTGCG TCGGCTGTCG CTACTGCATC
GCCGCCTGCC CGTACCACGT ACGCTTTATC AACCCGGTCA CCAACACCGC GGATAAGTGC
AATTTTTGTC GGGAAACCAA TCTGGCGGCC GGCAAGAAAC CGGCTTGCGT CGAGATCTGC
CCGACCAAGG CGCTGGTATT CGGCGACCTC AACGATCCGG AAAGCGATAT CTCGAAAATG
ATCAAAAGCA ATCCTATCTA CCGCAGCAAA GTCTACCTGG GCACCGGCCC CAACCTTTAC
CGCATACCGG GTAAATACGG AGAGAGCGAT CATGCATGA
|
|---|
| Protein sequence | MENYTRRRFI AIMGSALAVS GSGLPAAAQD TTAPSVGPRP VKYGILHNEL RCIGCKACMT
ACRKTNQVPE GVTRLDIIQT VDIPATDTSK PIKQFFRQSC QHCDNPPCVS VCPTGASFKD
ALTGIVDVND KRCVGCRYCI AACPYHVRFI NPVTNTADKC NFCRETNLAA GKKPACVEIC
PTKALVFGDL NDPESDISKM IKSNPIYRSK VYLGTGPNLY RIPGKYGESD HA
|
|---|
| |