Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3168 |
Symbol | dapD |
ID | 8121033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3611800 |
End bp | 3612624 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644853545 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_003005469 |
Protein GI | 251790748 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCAAC TACAGAACAT CATCGAAACC GCATTTGAGC GTCGCGCAGA GATAACCCCA GCCAATGTGG ATACGGTGAC GCGCGAAGCG GTAAATCAGG TTATCAGCCA GTTAGACAGC GGTGTGCTGC GAGTGGCTGA AAAAATCAAC GGCCAGTGGG TAACGCATCA GTGGCTGAAG AAAGCGGTGC TGCTCTCTTT CCGCATCAAT GACAACCAAC TGATGGAAGG AGCCGAAACC CGCTACTACG ACAAAGTGCC GATGAAATTC GCCGGCTACG ATGAAGCGCG TTTCCAGCGT GAAGGTTTCC GCGTCGTACC GCCCGCCAGC GTACGCCAGG GCGCATTCAT CGCCCGGAAT ACCGTGCTGA TGCCGTCTTA CGTCAACATC GGCGCCTACG TTGACGAAGG CACCATGGTC GACACCTGGG CCACCGTCGG TTCGTGTGCC CAGATTGGTA AAAATGTGCA TCTGTCCGGC GGTGTTGGCA TCGGCGGCGT GCTGGAACCA CTGCAGGCCA ACCCGACCAT CATCGAAGAC AACTGCTTTA TCGGCGCCCG TTCCGAAGTG GTGGAAGGCG TGATCGTAGA AGAAGGGTCT GTTATCTCGA TGGGCGTCTT CATCAGCCAG AGCACCAGAA TTTACGATCG TGAAACCGGT GAAATACATT ACGGCCGCGT ACCGGCCGGT TCAGTCGTCG TGTCCGGTAA CCTGCCTGCC AAAGACGGCA GCCACAGCCT TTATTGTGCC GTGATAGTGA AAAAAGTGGA TGCAAAAACC CGCGGAAAAG TGGGCATTAA TGAGTTATTG CGCACTATCG ACTAA
|
Protein sequence | MQQLQNIIET AFERRAEITP ANVDTVTREA VNQVISQLDS GVLRVAEKIN GQWVTHQWLK KAVLLSFRIN DNQLMEGAET RYYDKVPMKF AGYDEARFQR EGFRVVPPAS VRQGAFIARN TVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED NCFIGARSEV VEGVIVEEGS VISMGVFISQ STRIYDRETG EIHYGRVPAG SVVVSGNLPA KDGSHSLYCA VIVKKVDAKT RGKVGINELL RTID
|
| |