Gene Dd1591_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3168 
SymboldapD 
ID8121033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3611800 
End bp3612624 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content55% 
IMG OID644853545 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_003005469 
Protein GI251790748 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAAC TACAGAACAT CATCGAAACC GCATTTGAGC GTCGCGCAGA GATAACCCCA 
GCCAATGTGG ATACGGTGAC GCGCGAAGCG GTAAATCAGG TTATCAGCCA GTTAGACAGC
GGTGTGCTGC GAGTGGCTGA AAAAATCAAC GGCCAGTGGG TAACGCATCA GTGGCTGAAG
AAAGCGGTGC TGCTCTCTTT CCGCATCAAT GACAACCAAC TGATGGAAGG AGCCGAAACC
CGCTACTACG ACAAAGTGCC GATGAAATTC GCCGGCTACG ATGAAGCGCG TTTCCAGCGT
GAAGGTTTCC GCGTCGTACC GCCCGCCAGC GTACGCCAGG GCGCATTCAT CGCCCGGAAT
ACCGTGCTGA TGCCGTCTTA CGTCAACATC GGCGCCTACG TTGACGAAGG CACCATGGTC
GACACCTGGG CCACCGTCGG TTCGTGTGCC CAGATTGGTA AAAATGTGCA TCTGTCCGGC
GGTGTTGGCA TCGGCGGCGT GCTGGAACCA CTGCAGGCCA ACCCGACCAT CATCGAAGAC
AACTGCTTTA TCGGCGCCCG TTCCGAAGTG GTGGAAGGCG TGATCGTAGA AGAAGGGTCT
GTTATCTCGA TGGGCGTCTT CATCAGCCAG AGCACCAGAA TTTACGATCG TGAAACCGGT
GAAATACATT ACGGCCGCGT ACCGGCCGGT TCAGTCGTCG TGTCCGGTAA CCTGCCTGCC
AAAGACGGCA GCCACAGCCT TTATTGTGCC GTGATAGTGA AAAAAGTGGA TGCAAAAACC
CGCGGAAAAG TGGGCATTAA TGAGTTATTG CGCACTATCG ACTAA
 
Protein sequence
MQQLQNIIET AFERRAEITP ANVDTVTREA VNQVISQLDS GVLRVAEKIN GQWVTHQWLK 
KAVLLSFRIN DNQLMEGAET RYYDKVPMKF AGYDEARFQR EGFRVVPPAS VRQGAFIARN
TVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVFISQ STRIYDRETG EIHYGRVPAG SVVVSGNLPA
KDGSHSLYCA VIVKKVDAKT RGKVGINELL RTID