Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3161 |
Symbol | |
ID | 8121026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3602925 |
End bp | 3604118 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644853538 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_003005462 |
Protein GI | 251790741 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.289347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAC TGACAATCCT CGGTTCCACC GGTTCTATTG GCGTCAGTTC CCTGGCCGTG GTCAGGGCCA ACCCAGACAA GTTTTCGATT ATGGCGTTGG TCGCCGGACG CAATGTTTCT CTGATGGCGG AGCAATGCCT GGAGTTCTGC CCCGCTTATG CCTCTATGGC GGATGAGGAC GCCGCGCGTG AACTGCGCCT CAGCTTACGG GATGCTGGCA GCAAGACGGT AGTGCTATCG GGCGAGCAGG CTGCCTGTGA GCTGGCGGCG CTGGATGAGG TCGATCAGGT GATGGCGGCG ATTGTCGGTG CAGCCGGACT GTTGCCGGCA TTAGCGGCGA TCCGCGCCGG CAAGCAGGTT CTGCTGGCGA ATAAAGAATC GCTGGTGACC TGTGGTCGTC TGTTCATGGA CGAGGTAGCG AAAAACGGGG CGCAATTGTT GCCGGTTGAT AGCGAACACA GTGCCATTTT TCAGAGTTTA CCTGAGCCAA TCCAGCGGCA ACTGGGATAT GCTTCCCTAA CGCAATACGG GGTTGAGCGG GTGGTGCTGA CCGGTTCGGG AGGCCCATTC CGTGAGATTC CGTTTGCCGC ATTGGAGAGC GTCACTCCTG AGCAGGCGTG CGCCCATCCC AACTGGTCTA TGGGGCGAAA GATTTCGGTG GATTCCGCCA CCATGATGAA TAAGGGACTG GAATATATTG AGGCGCGTTG GCTGTTTAAC GCCTCTGAAT CACAGATGGA AGTGGTTATC CATCCCCAAT CCGTTATCCA TTCTATGGTG CGTTATCGGG ATGGCAGTGT ATTGGCGCAG TTGGGTACGC CAGATATGCG AACCCCTATA GCCTATGCGA TGGCTTATCC TGACCGTGTT TTTTCCGGTG CGCCTGCGCT TGATTTCTGC CAGTTGGGGG CGTTGACCTT TTCTGCACCG GATTTCCAGC GTTACCCTTG TCTGCGTCTG GCTATTGATG CATGTAATCA AGGGCAAGCC GCCACTACGG CGCTCAATGC GGCAAATGAA ATTGCGGTTG CGGCATTCCT TCAATCCGGT ATTCGTTTTA CCGATATCGC CGCAGTCAAT CAGTGCGTGA TGGAACAACT GACACTACCT GAACCGCAAA GTGTTGATGA TGTATTGTCT ATCGATACCT GGGCAAGACA AGCCGCAGAA AATGTGTTGC GGCGTTATCA GTGA
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Protein sequence | MKQLTILGST GSIGVSSLAV VRANPDKFSI MALVAGRNVS LMAEQCLEFC PAYASMADED AARELRLSLR DAGSKTVVLS GEQAACELAA LDEVDQVMAA IVGAAGLLPA LAAIRAGKQV LLANKESLVT CGRLFMDEVA KNGAQLLPVD SEHSAIFQSL PEPIQRQLGY ASLTQYGVER VVLTGSGGPF REIPFAALES VTPEQACAHP NWSMGRKISV DSATMMNKGL EYIEARWLFN ASESQMEVVI HPQSVIHSMV RYRDGSVLAQ LGTPDMRTPI AYAMAYPDRV FSGAPALDFC QLGALTFSAP DFQRYPCLRL AIDACNQGQA ATTALNAANE IAVAAFLQSG IRFTDIAAVN QCVMEQLTLP EPQSVDDVLS IDTWARQAAE NVLRRYQ
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