Gene Dd1591_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3158 
Symbol 
ID8121023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3599738 
End bp3601093 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content55% 
IMG OID644853535 
Productzinc metallopeptidase RseP 
Protein accessionYP_003005459 
Protein GI251790738 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00293978 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATA TTCTCTGGAG CCTGGCTGCA TTCGTCGTTG CGCTCGGTGT GTTGATCACT 
GTGCATGAGT TTGGGCATTT CTGGGTCGCC CGCCGTTGCG GCGTTCGTGT TGAACGGTTC
TCCATCGGCT TCGGCAAGGC GTTATGGCGC CGCCGCGATC GACAGGGGAC AGAATATGTG
ATCGCACTGA TTCCGCTCGG CGGTTACGTG AAAATGCTTG ACGGCCGGGT CGATGAGGTG
CCTGCCGGGC TCAGGCATCA GGCATTCAAC CACAAAATGA TCTGGCAGCG AGCGGCGATT
GTCAGCGCCG GGCCGATTGC CAACTTCGTA TTTGCCGTCA TGGCTTATTG GCTGGTGTTC
ATCATTGGCG TTCCGGGTAT CCGCCCGGTA GTCGGCGAGG TTTTACCCGG CTCGATTGCG
GCAACGGCCC AAATTTCGCC GGGAACGGAA CTAAAGTCGA TTGACGGTAT CGAAACGCCT
GACTGGGATA GCGCGCGTCT GGCCTTGATT GGCAGGATTG GCGAGCCTGA CGTGGTGATT
GAAACTGCGC CGTTAGGTAC CGCTAATACA GAGAGCAAAC GGCTTGAGTT GCAAGACTGG
CATTTCGACC CGGAAAGGCA GGATCCGGCG GTATCGCTGG GGATTGTGCC TAAAGGGCCG
CAGGTTGAAG CGGTGCTGAC ACAGGTTCAG CCTCGTTCCG CGGCTGAAAA AGCGGGTTTG
CAAGTCGGGG ACAGGATCGT TAAAGTCGGT GGTCAACTGC TGGCGCGCTG GCAGCAGTTT
GTCATTGTCG TGCGTGATAA CCCAGGTAAA CCGGTTGCGC TGGAGGTGGA AAGAGGCGGA
AATACCCTTT CTGTTACTCT AACTCCAGAC AGTAAAACGG TGGCGAAAGG GCGTCTGGAA
GGGTTCGCCG GCGTTGTGCC TAAAGTGACC CCTCTGCCTG ATGAGTATAA AACCGTGCGC
CAGTATGGGC CGTTCAGCGC CATCTATGAG GCCGGGAATA AAACCTGGCT GTTGATGAAG
CTGACAGTCA GTATGCTGGG TAAGTTGATT ACCGGCGACG TGAAACTGAA TAACCTGAGC
GGCCCGATTT CCATCGCGCA GGGAGCAGGC ATGTCAGCAG ATTACGGATT GGTGTATTAC
CTGATGTTTT TGGCGCTGAT TAGCGTCAAT CTGGGGATTA TCAATCTGTT CCCTCTGCCG
GTACTGGATG GTGGTCATCT GCTCTTCCTG GCTATCGAAA AGCTGAAGGG TGGACCGGTT
TCCGAGCGTG TGCAGGACGT CAGTTATCGC ATTGGCACGG TGTTGCTGGT GATGTTAATG
GGTCTTGCAC TTTTCAATGA TTTCTCCCGC CTTTAG
 
Protein sequence
MLNILWSLAA FVVALGVLIT VHEFGHFWVA RRCGVRVERF SIGFGKALWR RRDRQGTEYV 
IALIPLGGYV KMLDGRVDEV PAGLRHQAFN HKMIWQRAAI VSAGPIANFV FAVMAYWLVF
IIGVPGIRPV VGEVLPGSIA ATAQISPGTE LKSIDGIETP DWDSARLALI GRIGEPDVVI
ETAPLGTANT ESKRLELQDW HFDPERQDPA VSLGIVPKGP QVEAVLTQVQ PRSAAEKAGL
QVGDRIVKVG GQLLARWQQF VIVVRDNPGK PVALEVERGG NTLSVTLTPD SKTVAKGRLE
GFAGVVPKVT PLPDEYKTVR QYGPFSAIYE AGNKTWLLMK LTVSMLGKLI TGDVKLNNLS
GPISIAQGAG MSADYGLVYY LMFLALISVN LGIINLFPLP VLDGGHLLFL AIEKLKGGPV
SERVQDVSYR IGTVLLVMLM GLALFNDFSR L