| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3105 |
|---|
| Symbol | phoR |
|---|
| ID | 8117803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3538984 |
|---|
| End bp | 3540306 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644853482 |
|---|
| Product | phosphate regulon sensor protein |
|---|
| Protein accession | YP_003005406 |
|---|
| Protein GI | 251790685 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGAAC GTTTGTCCTG GAAAAAGCTG GCGCTGGAGC TGGCTTTTTT TTGTTTGCCC
GGTTTGTTGC TGGGGCTGAT CATCGGCTAT CAGCCCTGGT TTCTGTTGGC GTCGGTGCTG
GCGGCACTGT GCTGGAACTT CTATAACCAA CTGCGCCTGT CCTACTGGCT GTGGGTTGAC
CGCAGTATGA CGCCGCCGCC CGGCCGCTGG AGCTGGGAGC CGCTGTTTTA CGGCCTGTAT
CAGATGCAAC TGCGCAACCG CCGCCGCCGC CGTGAGTTGG CGCTGCTGAT CAAACGCTTT
CGCAGCGGAG CGGAGTCGTT GCCGGATGCG GTGGTGATCA CCACCGAAGA GGGCGGCATC
ATTTGGTGTA ACCGGCTGGC TCAGCACCTG CTTAGCTTTC GCTGGCCGGA AGACAATGGT
CAGAATATCC TCAACCTGCT GCGTTACCCG GAATTCACCC AGTATATGCA ACAGCAGGAT
TTCAGCCGCC CGCTGACGTT GACGCTAAAA AACGCCCATC ATGTGGAATT CCGGGTGATG
CCCTATTCGG AAGGCCAATT GCTGATGGTG GCCCGCGATG TCACTCAGAT GCACCAACTG
GAAGGGGCGC GGCGTAACTT TTTTGCCAAC GTCAGCCACG AATTACGTAC GCCGTTGACG
GTGTTGCAAG GCTATCTGGA AATGATGAGC GACGAATCGC TGGATGGCGC GTTGCAGTCC
AAGGCGTTGC ACACCATGCA GGAGCAAACC CGCCGTATGG ACGGGCTGGT GCGGCAATTG
CTGACGCTGT CGCGCATTGA GGCCGCCGCC GCTATCGATC TCAACGAGAA GGTGGATATC
CCGCTGATGC TACGGGTGCT CAAACGTGAA GCCGACACTC TCAGCCAGGG GCGTCACGAG
ATTGTGTTTC GCGTCAACGA GCAACTGCAG GTGTTCGGCA ACGAGGAGCA ACTGCGCAGC
GCGGTGTCGA ATCTGGTGTA TAACGCCGTT AATCATACGC CGTCGGGCAC CCGCATTGAG
GTGTGCTGGC AGCAAACGCC GCAGGGCGCG CAGTTCCAGG TCAGCGATAA CGGCCCGGGG
ATTGCCGCCG AACATCTCCC TCGCTTAACC GAGCGTTTTT ATCGTGTCGA TAAGGCCCGC
TCGCGGCAGA CCGGCGGCAG CGGGCTGGGG CTGGCTATCG TCAAACATGC GCTCAGCCAC
CACGACTCCC GGCTGGAGAT CCTCAGCGAA GAAGGTGCCG GTTCCCGCTT TATGTTCACC
TTGCCAAACC GGCTGATTGT TCGTTCGGTG CTGGGGCAGA ATGCCGTGAA TCCACAGTTG
TGA
|
|---|
| Protein sequence | MLERLSWKKL ALELAFFCLP GLLLGLIIGY QPWFLLASVL AALCWNFYNQ LRLSYWLWVD
RSMTPPPGRW SWEPLFYGLY QMQLRNRRRR RELALLIKRF RSGAESLPDA VVITTEEGGI
IWCNRLAQHL LSFRWPEDNG QNILNLLRYP EFTQYMQQQD FSRPLTLTLK NAHHVEFRVM
PYSEGQLLMV ARDVTQMHQL EGARRNFFAN VSHELRTPLT VLQGYLEMMS DESLDGALQS
KALHTMQEQT RRMDGLVRQL LTLSRIEAAA AIDLNEKVDI PLMLRVLKRE ADTLSQGRHE
IVFRVNEQLQ VFGNEEQLRS AVSNLVYNAV NHTPSGTRIE VCWQQTPQGA QFQVSDNGPG
IAAEHLPRLT ERFYRVDKAR SRQTGGSGLG LAIVKHALSH HDSRLEILSE EGAGSRFMFT
LPNRLIVRSV LGQNAVNPQL
|
|---|
| |