Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3094 |
Symbol | secF |
ID | 8117792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3526217 |
End bp | 3527188 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644853471 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_003005395 |
Protein GI | 251790674 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.278166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCACAGG AATATACTGT TGAACAATTG AACTACGGCC GTAAAGTTTA TGACTTTATG CGCTGGGACT ACTGGGCTTT CGGTTTGTCC GGTTTGTTGT TGATCCTGTC TATCGCCGTG ATGGGCGTGC GTGGTTTCAA CTGGGGACTG GATTTCACCG GTGGTACGGT TATCGAGATT TCGCTGGAAA AATCCGTGGA TCTGGAGCAG ATGCGTGAAG CGCTGCAGAA AGCCGGTTTT GCGGATCCGC TGGTACAGAA CTTCGGCAGC AGCCGCGACA TTATGGTACG TATGCCGCCT GCTCACGATG AGTCCGGCGG TCAGGCTCTC GGCAGCAAAG TTGTTAACGT GATCAACGAA TCAACCAGCC AGAATGCAGC GATTAAGCGC ATTGAATTCG TTGGGCCGAG CGTAGGGGCT GATCTGGCGC AGAATGGTGC CATGGCGTTG ATGGCGGCGT TAATCAGTAT TCTGGTCTAC GTCGGCTTTC GTTTCGAATG GCGTCTGGCT GCCGGGGTGG TGATTGCGTT GGCGCACGAC GTGATCATCA CTATGGGCAT ACTGTCGTTG TTCGATATTG AAATCGACCT GACGATTGTG GCGTCGCTGA TGTCGGTCAT CGGTTATTCG CTGAACGATA GCATCGTGGT GTCTGACCGT ATTCGTGAAA ACTTCCGCAA GATCCGCCGT GGAACGCCTT ACGAAATTTT CAACGTGTCG TTGACCCAAA CGTTGCACCG AACCTTGATC ACATCGGGAA CGACGTTGGT GGTGATCCTG ATGTTGTACC TGTTCGGCGG TGCGATGTTG AAAGGGTTCT CGTTGACCAT GTTGATTGGT GTGGCCATCG GTACGGTATC TTCTATTTAT GTCGCTTCCG CACTGGCGCT CAAGTTGGGT ATGAAACGCG AGCACATGTT GGTGCAGAAA GTGGAAAAAG AGGGCGCGGA CCAGCCGTCA TTGCTGCCGT AA
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Protein sequence | MAQEYTVEQL NYGRKVYDFM RWDYWAFGLS GLLLILSIAV MGVRGFNWGL DFTGGTVIEI SLEKSVDLEQ MREALQKAGF ADPLVQNFGS SRDIMVRMPP AHDESGGQAL GSKVVNVINE STSQNAAIKR IEFVGPSVGA DLAQNGAMAL MAALISILVY VGFRFEWRLA AGVVIALAHD VIITMGILSL FDIEIDLTIV ASLMSVIGYS LNDSIVVSDR IRENFRKIRR GTPYEIFNVS LTQTLHRTLI TSGTTLVVIL MLYLFGGAML KGFSLTMLIG VAIGTVSSIY VASALALKLG MKREHMLVQK VEKEGADQPS LLP
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