| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2937 |
|---|
| Symbol | |
|---|
| ID | 8118348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3344303 |
|---|
| End bp | 3345997 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644853308 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003005238 |
|---|
| Protein GI | 251790517 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0948744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTCC TAAAAAATAT TGCCATTCGC ACAGCGATGC TGTGGGTACT TGGCATTTTC
TGTGCGTTAT GGATTGCGGT TTCGGTTTAC ACCATGTACT CGTTCAAAAC CATGAATGAG
ACATCTAAAA CCAGTGCGTT GCTGGTTAAC AATATGAATT TAGTCAATAC CGGCAACGAC
CAGTATTTCC GCATGGTGAC CCGACTGGCT CGTGCGATTG ACTATCGGCA GAGCGGTGAT
AACCAGAAAG CGGACGAGCA GCAAAAATCG TCACAAGCCG CGCTGGATTT ACTGAAATCC
AACCTGGAAG CCTTCAAGAA GATCGATCAT GTCGGCATGT CGCCGGAATT GGTCGAAGCG
GTGACGCGTG ACTGGAGCAA CCTGATTACT CAAGGGGTTG AACCCATGTT CCAGCGTGCG
GTGGATAAAA AATTCGATGA GTATGACAAA TATGCCAAAG ACGTCGTGCC TGTCTTTAGC
CGGCAGTTCA ACGTCTCGTT CACTAACTTC AACAAGGCGG GATCAACGAT GTTCGTTGAT
GCCGGCGAAC GACTGGAAAC CATTACCGGC GTTGGGCAAA ACATTTTGCT GGCGGGGCTT
ATCGCCGGTT TGTTGATGTT GTTCCTGACT GATCGCTATC TGGTGGCTTA TCTGGTGCGC
CCGCTCAACG ATCTGCGGGA TCATTTCCTG GTTATTGCTT CCGGTCGTCT GGGAAAACCG
ATTTTGGATT TCGGCAACAA CTGCGTGGGC AAGCTGTTCC CGTTGCTGCG TGATATGCAA
ACCAGTCTTG CGAATACCGT CAGTACGATC CGCAGCAGTG CCGATTCTAT CTATCAGGGA
GTATCGGAAA TCGCCTCCGG CAACAACGAC CTTGCAGCCC GTACGGAGTC GCAGGCCGCT
GCGCTGGAAG AAAGCGCAGC CAGTATGGAA CAGCTGACCT CGACGGTGAA ACAGAACGCA
GAAAACGCCA GCCATGCCAG TCAATTGGCT CGTCAGGCTT CTACCACCGC CAGTAAAGGT
GGAGAACTGG TGGACAATGT GGTGAAAACC ATGGCCGAAA TCTCCGGCAG TTCGAAGAAA
ATTGCCGAGA TTACCAGTGT GATTAATGGC ATTGCTTTCC AGACCAATAT TCTGGCGCTG
AACGCAGCGG TTGAAGCCGC TCGGGCCGGT GAGCAAGGGC GCGGGTTCGC CGTCGTAGCC
GGTGAAGTAA GAAGCCTGGC GCAGCGTAGT GCGCAAGCGG CTAAAGAGAT CGAAAACCTG
ATTGCCGAGT CGGTGCGTTG CGTGGATAAC GGCTCTGCGC TGGTGGCCGA TGCCGGCAGC
ACCATGAGCG AGATCGTTAA GGCCGTGACG AACGTCACTG ATATCATGTC GGAAATTGCG
ACGGCATCGG ATGAGCAAAG TAAAGGCATT GCGCAGGCAG GACAGGCGAT TACGGAAATG
GACGGCGTCA CTCAGCAAAA CGCCGCGCTG GTGCAGGAAG CGTCTGCGGC TACCCGCTCG
CTGGAAGAGC AGGCGATGGT GTTGACCGAG GCGGTATCGG TATTCCGACT GACGGAGGAA
CAAATGGCAG GTCTGTCGCC AAGACGTGAA CGTCAGGCAG CCGTCAAAGC CGTATCAGCC
CCGGCAGCCA AAGCCTTGCC GGCTGCTCCG GCAAGCAGCG GTAAGAAGAG CAACGATAAC
TGGGAAACGT TCTAA
|
|---|
| Protein sequence | MQFLKNIAIR TAMLWVLGIF CALWIAVSVY TMYSFKTMNE TSKTSALLVN NMNLVNTGND
QYFRMVTRLA RAIDYRQSGD NQKADEQQKS SQAALDLLKS NLEAFKKIDH VGMSPELVEA
VTRDWSNLIT QGVEPMFQRA VDKKFDEYDK YAKDVVPVFS RQFNVSFTNF NKAGSTMFVD
AGERLETITG VGQNILLAGL IAGLLMLFLT DRYLVAYLVR PLNDLRDHFL VIASGRLGKP
ILDFGNNCVG KLFPLLRDMQ TSLANTVSTI RSSADSIYQG VSEIASGNND LAARTESQAA
ALEESAASME QLTSTVKQNA ENASHASQLA RQASTTASKG GELVDNVVKT MAEISGSSKK
IAEITSVING IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRSLAQRS AQAAKEIENL
IAESVRCVDN GSALVADAGS TMSEIVKAVT NVTDIMSEIA TASDEQSKGI AQAGQAITEM
DGVTQQNAAL VQEASAATRS LEEQAMVLTE AVSVFRLTEE QMAGLSPRRE RQAAVKAVSA
PAAKALPAAP ASSGKKSNDN WETF
|
|---|
| |