| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2838 |
|---|
| Symbol | |
|---|
| ID | 8120534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3228407 |
|---|
| End bp | 3229168 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644853208 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003005140 |
|---|
| Protein GI | 251790419 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAC ACACCAAACA AGAGCGCGAT CAGGATGCTC ATGTGGCGAT AGTCACCGGC
GCGTCGCGGG GCATCGGCAG AGCGATTGCC CTCAAGCTGG CGCAACAAGG ATGGCGGGTG
GTGGTGAACT TCGCCCGGCA ACGTCAGCAG GCGGACGAGG TGGTAAGTCG CATTCACGAG
CTGGGAGGAT GTGCGCTGGC GATTCAGGCG CAGGTAGAGG AGCCCGAGCA GGTGGCGGCG
CTGTTTTTGC AGACGAAAGC GCAATTCGGG CGTATCGACG CGGTGATCAA CAGCGCCGGG
GTGATGGCGA ACACACCGAT TGCCGATGGC GATCTGGCGC AGTTTGACAG GCTGATCGCG
ACCAATCTGC GTGGTGCGTT CATTGTGCTG GGGGAAGCGG CCCGGCAGGT GGAAACGGGT
GGGCGAATTA TTGCGTTGTC TACCAGCGTA ATCGCCCGTT CGCTGCCCAG TTATGGCCCT
TATATCGCGT CGAAGGCCGG GGTGGAAGGG CTGGTGCGAG TACTGGCGAA TGAGCTGCGT
GGCCGCGAGA TTACGGTAAA TGCCGTCGCG CCGGGACCCG TGGCAACCGA ACTGTTTTTT
AACGGTAAGA CGGATGCGCA GGTGGCGGCC ATTACTGCTA TGACGCCGCT GGAAAGGCTG
GGGGAACCAG AGGATATCGC CAATGTCGTG GCTTTTCTGG TCGGGCCGGA AGGGGGCTGG
ATCGATGGTC AGGTGGTTCG CAGCAATGGC GGGTTTGCGT AA
|
|---|
| Protein sequence | MQQHTKQERD QDAHVAIVTG ASRGIGRAIA LKLAQQGWRV VVNFARQRQQ ADEVVSRIHE
LGGCALAIQA QVEEPEQVAA LFLQTKAQFG RIDAVINSAG VMANTPIADG DLAQFDRLIA
TNLRGAFIVL GEAARQVETG GRIIALSTSV IARSLPSYGP YIASKAGVEG LVRVLANELR
GREITVNAVA PGPVATELFF NGKTDAQVAA ITAMTPLERL GEPEDIANVV AFLVGPEGGW
IDGQVVRSNG GFA
|
|---|
| |