| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2748 |
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| Symbol | |
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| ID | 8119751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3117331 |
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| End bp | 3120945 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644853119 |
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| Product | urea carboxylase |
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| Protein accession | YP_003005051 |
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| Protein GI | 251790330 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACA CCGTACTGAT TGCCAACCGT GGTGAAATTG CCTGTCGTGC CATCCGCACA
TTGAAACGTC TGGGGGTCAC CAGCGTAGCG GTGTATTCCG ATGCGGATAA AAACGCTGAA
CATGTGAAGC AGGCGGATGT GGCGCTGGCG CTGGGGGGCG AAAAAGCCGG CGACAGCTAT
CTGCGCATCG ACAAGATTAT CGCCGCGGCG CAGCACAGCG GCGCACAGGC CATCTGGCCG
GGATACGGCT TTCTTTCGGA AAGCCTGCCG TTTGCGCAGG CTTGTGAAAA CGCGGGGATA
GTGTTTATCG GGCCGACGGC GCAACAGATT GGCGAGTTCG GCCTCAAGCA CCGGGCGCGC
GAACTGGCGG CGCAGGCCGG CGTGCCGATG ACGCCGGGCA CCGGGTTGCT CGGCTCTCTG
GCGGACGCCC TCAGCGCGGC GGCGCGCATC GGTTATCCGG TGATGCTGAA AAGTACGGCC
GGCGGCGGCG GGATCGGCCT GACGCGTTGT GCCGACGAAC CGGCGTTACG GCAGGCATGG
GACAGCGTGC GGCGACTGGG TGAGCAGTTT TTCAGCGACG CCGGGGTGTT TGTCGAGCGT
TGCGTCGATC ACGCTCGCCA TATCGAAGTG CAAATCTTTG GTGATGGCAA AGGCAACGTG
GTGGCGCTTG GCGAGCGGGA CTGTTCTTTG CAGCGTCGTA ACCAAAAAGT GGTGGAGGAG
AGCCCGGCGC CGCATTTGCC TGCGGCGACC CGCGACGCGT TGCTGCGCGC GGCGATGCAA
CTGGGCGCAT TGGTGAATTA TCGCAGCGCC GGGACGGTGG AATTTATCTA CGACGCCGGG
CAGGACGCGT TCTATTTTCT CGAAGTGAAC ACCCGTTTGC AGGTTGAGCA TCCCGTCACC
GAGTGCGTGA CTGGGCTGGA TCTGGTGGAG TGTATGTTGC GCGTCGCTGC GGATGAGCCC
ATCGACTGGG CGCGTCTGCA ACAAGCGCCG CAAGGGGCGG CCATTGAGGT GCGCCTCTAC
GCCGAAAATC CGCTGAAGAA CTTCCAGCCA AGCCCCGGGG TATTAACCGA AGTGGCTTTC
CCGGCGGGGG TACGCATAGA CTCCGGCGTG ACGACCGGCA GCGAGGTGTC GGCGTTTTAC
GACCCGATGA TCGCCAAATT GATTGTACAT GGCGCGGACC GCGCCGAAGC GCTGGCAAAA
CTACAGGCGG CGCTTGATGC CACCCGTTTG CACGGTATTT CCACCAATCT GGATTATCTG
CGTCAAATTA CCGCCGGTGA TGCTTTTCAG CAGGGGCGTG TCTGGACGCG GATGCTCGAC
GGCGTTATCG CCCAATCGGC GGTGATTGAA GTGATCCAGC CCGGCACCTG GAGCAGCATT
CAGGATTATC CGGGGCGTCT GGGCTATTGG GATATCGGCG TACCGCCGTC CGGCCCGATG
GATGATTTCG CTTTCCGCCT CGCCAACCGC ATCGTCGGCA ACCATGAGGC GGCGGCAGGG
CTGGAATTCA CCCTGCAAGG CCCGGAATTG TTGTTCCACA GTGAAGCGTT AATCGCGCTG
ACCGGGGCGG ACTGCCAGGC CACGCTTGAT GGCGAGGCGG TGCCGCTGTG GCAGCCGGTG
AGTGTGACGG CGGGGCAGAC GCTGGCGCTG GGGCGCGCGC TGCGCGGATG CCGCGCTTAT
CTGGCGGTGC GCAATGGTCT CGACGTGCCG GAGTACTTAG GCAGCCGCTC CACCTTTGCG
CTGGGGCAGT TCGGCGGCCA CGCCGGGCGT ACGCTGAACG TGGCGGATTT GCTGCCGATC
TCACATCCTG AGCGGGCTGC CTGTACCACG CCGGCACCGG TGAGCGAACC ACAAGCGCTG
CCGGCATCGT TGATCCCGAC GTATGGCGAG GCGTGGCGAA TCGGGGTGCT GTACGGGCCG
CATGGCGCGC CGGATTTCTT TACTCCGGCG GCGATCGACG CGTTTTTCGC CAGCGACTGG
CAAGTCCATT ACAACTCCAA CCGCCTCGGC GTTCGGCTGG TTGGGCCGAA ACCGAGCTGG
ACGCGTCCGA ACGGCGGCGA GGCGGGTCTG CACCCCTCGA ACGTGCACGA CTGCGAATAC
GCGATAGGGG CGATTAACTT CACCGGCGAT TTTCCGGTGA TCCTGACGCG CGACGGCCCA
AGCCTCGGCG GCTTCGTCTG CCCGGTGACT ATCGCCAAAG CGGAGTTGTG GAAGGTCGGG
CAGGTGAAAC CCGGCGATCG AATTCGTTTC TACCCGATAA GCGTAGAAGA GGCGGTTGCA
CTGGAACACG CGCAGGAGCA CTGCATTACG ACGTTGAACG CCGGTCGCGT CGCCGCGTTC
GTCGCGCCCT CTCTGGCTGA TCGTGACGGT GTTTCGGCGG CGGCGCTGGT ATCGCTGCCT
GCTACCGCCG CAGCCCCGGC GATTGTCTAT CGCCAGGCCG GGGATAACTA CCTTCTGATT
GAGTACGGCG ATAACGTGCT GGATCTGGCG TTGCGTTTGC GTGTTCACCT GTTGATGGAA
CAACTGCGCA CACGGGCGCA TCCGGGTGTG AAGGAGCTGT CTCCCGGCGT ACGTTCGCTG
CAAGTTCGCT ACGACAGCCG GCAAATTAGC CAGTCGGCGC TGGTGACGTT ACTGCTGGAG
CTTGAGACGC GCATTGGCGA CGTCAGCCAG ATGAAGGTGC CGTCGCGTAT TGTTCACATG
CCGATGGCGT TTGAAGACAG CGCCACGCTC GATGCCGTCG GCCGCTATCA AGACACGGTG
CGCGCCAGTG CGCCGTGGCT ACCGAATAAT GTTGACTTTA TCCAACGCAT CAATGGGTTA
GCCAGTCGCA ATGCGGTAAA ACAGACCTTG TTTGACGCCA GCTACCTGAT TCTGGGGCTG
GGTGACGTCT ATCTCGGCGC GCCGTGCGCC GTACCGGTCG ATCCGCGCCA TCGCCTGCTG
AGTTCGAAAT ATAACCCGGC GCGCACCTTT ACCGCAGAAG GCACGGTAGG CATCGGCGGG
ATGTACATGT GCATCTATGG CATGGATTCT CCCGGCGGTT ATCAACTGGT GGGGCGGACA
TTGCCTATCT GGAACAAATT CCTGAAAAAC GAGCAGTTTC AGGCCGGGGA GCCTTGGTTG
CTGCGCTTCT TTGATCAGGT CCGTTTCTAT CCGGTGAGCG AAGCGGAACT GAATCGGTTA
CGTGATGATT TCCGTGAAGG ACGCGCGGCT ATCCGGATCG AAGAGACGGT GTTTGATTTT
CAGGCGCATC TGCAATTCCT GCACACCCAT GCGGCAGACA TCGCGGATTT TCGTGCCCGT
CAGGCCGCCG CTTTTGAGGC TGAAGTCGAA CGCTGGCAGC AGGACGATCA GGCCGTGCTG
GAAACCCCAG TCCCTGACAC GGCGGAGGTT GCCGACGACG AGGCGTTGCC GGTACGTGCC
GACATGAACG GCAACGTCTG GAAGGTGCTG GTCACGCCGG GGAGCCAGGT TGATGCCGGT
CAGCCGCTGA TCATCGTCGA AGCGATGAAA ATGGAACTGG CGATTAACGC GCCGCAAAGC
GGCAAAGTCA AACGCATTGC CTGCCAGCCC GGTCGCCCGG TCAGCCCCGG CGACGCGCTG
CTGTGGCTGG AATAA
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| Protein sequence | MFNTVLIANR GEIACRAIRT LKRLGVTSVA VYSDADKNAE HVKQADVALA LGGEKAGDSY
LRIDKIIAAA QHSGAQAIWP GYGFLSESLP FAQACENAGI VFIGPTAQQI GEFGLKHRAR
ELAAQAGVPM TPGTGLLGSL ADALSAAARI GYPVMLKSTA GGGGIGLTRC ADEPALRQAW
DSVRRLGEQF FSDAGVFVER CVDHARHIEV QIFGDGKGNV VALGERDCSL QRRNQKVVEE
SPAPHLPAAT RDALLRAAMQ LGALVNYRSA GTVEFIYDAG QDAFYFLEVN TRLQVEHPVT
ECVTGLDLVE CMLRVAADEP IDWARLQQAP QGAAIEVRLY AENPLKNFQP SPGVLTEVAF
PAGVRIDSGV TTGSEVSAFY DPMIAKLIVH GADRAEALAK LQAALDATRL HGISTNLDYL
RQITAGDAFQ QGRVWTRMLD GVIAQSAVIE VIQPGTWSSI QDYPGRLGYW DIGVPPSGPM
DDFAFRLANR IVGNHEAAAG LEFTLQGPEL LFHSEALIAL TGADCQATLD GEAVPLWQPV
SVTAGQTLAL GRALRGCRAY LAVRNGLDVP EYLGSRSTFA LGQFGGHAGR TLNVADLLPI
SHPERAACTT PAPVSEPQAL PASLIPTYGE AWRIGVLYGP HGAPDFFTPA AIDAFFASDW
QVHYNSNRLG VRLVGPKPSW TRPNGGEAGL HPSNVHDCEY AIGAINFTGD FPVILTRDGP
SLGGFVCPVT IAKAELWKVG QVKPGDRIRF YPISVEEAVA LEHAQEHCIT TLNAGRVAAF
VAPSLADRDG VSAAALVSLP ATAAAPAIVY RQAGDNYLLI EYGDNVLDLA LRLRVHLLME
QLRTRAHPGV KELSPGVRSL QVRYDSRQIS QSALVTLLLE LETRIGDVSQ MKVPSRIVHM
PMAFEDSATL DAVGRYQDTV RASAPWLPNN VDFIQRINGL ASRNAVKQTL FDASYLILGL
GDVYLGAPCA VPVDPRHRLL SSKYNPARTF TAEGTVGIGG MYMCIYGMDS PGGYQLVGRT
LPIWNKFLKN EQFQAGEPWL LRFFDQVRFY PVSEAELNRL RDDFREGRAA IRIEETVFDF
QAHLQFLHTH AADIADFRAR QAAAFEAEVE RWQQDDQAVL ETPVPDTAEV ADDEALPVRA
DMNGNVWKVL VTPGSQVDAG QPLIIVEAMK MELAINAPQS GKVKRIACQP GRPVSPGDAL
LWLE
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