| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2609 |
|---|
| Symbol | |
|---|
| ID | 8118017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2958876 |
|---|
| End bp | 2959709 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644852988 |
|---|
| Product | malonate decarboxylase subunit beta |
|---|
| Protein accession | YP_003004921 |
|---|
| Protein GI | 251790200 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
|---|
| TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.17179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACG ACCGCAGTTT TATCGAACTG AAAGCGCGGG AACGTGCCCA CGCGCTGCTG
GATGAAGGCA GCTACCGCGA ACTGCTCGGC CCGTTTGACG GCATCGTTTC GCCGTGGCTG
GGGCCGCAGG GGATTGTGGT GCAGTCCGAC GACGGCATGG TGGTGGCGAA AGGCACGTTG
CAGGGCAAAC CGACGGTGGT GATCGCCATT GAAGGGGCGT TTCAGGGCGG CAGCATGGGG
GAAGTCTCCG GGGCCAAGAT GGCCGCCGCG CTGGAACTGG CGGCTGACGA CCAACGTAAC
GGCATCCCGA CGCAGGCGAT TCTGTGTCTG GAAACCGGCG GGGTACGGTT GCAGGAGGCC
AATCTGGGGC TGGCGGCGAT CGCCGATATC CACGCGGCTA TCGTCGACCT GCGCCGCTAC
ACGCCAGTTG TCGGCATCAT CGCCGGGACC GTCGGTTGCT TTGGCGGCAT GTCGATTGCT
GCGGCGCTGT GCAGCCACTT GATTGTCACC CGCGAGGCGC GTCTGGGGCT GAATGGTCCG
CAAGTGATTG AACAGGAAGC CGGGGTCGCT GAGTACGACT CGCGTGATCG TCCGTTTATC
TGGAGCATGA CCGGCGGCGA AATTCGGCAC CACATCGGCC TGGCCGACAG CCTGGTGGCC
GATGGTGTGA ACGCCGTCAA GCAAGCGGTG AACGACGCGC TCGCCGCTGG CGTACCGGCG
CAGCACCGTT CGAATAACTA TGCATGGTAT CTGGCGCGCC TGAGCGATGC CGATACCCGG
GTGCAGGCCG ATACGCAACA GATCCAACAG CTTTTCGGGG AGGTAAAACC ATGA
|
|---|
| Protein sequence | MRDDRSFIEL KARERAHALL DEGSYRELLG PFDGIVSPWL GPQGIVVQSD DGMVVAKGTL
QGKPTVVIAI EGAFQGGSMG EVSGAKMAAA LELAADDQRN GIPTQAILCL ETGGVRLQEA
NLGLAAIADI HAAIVDLRRY TPVVGIIAGT VGCFGGMSIA AALCSHLIVT REARLGLNGP
QVIEQEAGVA EYDSRDRPFI WSMTGGEIRH HIGLADSLVA DGVNAVKQAV NDALAAGVPA
QHRSNNYAWY LARLSDADTR VQADTQQIQQ LFGEVKP
|
|---|
| |