| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2130 |
|---|
| Symbol | |
|---|
| ID | 8118173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2450841 |
|---|
| End bp | 2451590 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644852514 |
|---|
| Product | 3-hydroxy acid dehydrogenase |
|---|
| Protein accession | YP_003004452 |
|---|
| Protein GI | 251789731 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTT TGGTTACCGG TGCGACGGCG GGCTTTGGTG AGGCGATTAC CCGGCGGTTT
ATCAAAGAAG GTCATCAGGT TATCGCCACA GGGCGTCGTC AGGAACGTCT TGATGCGTTG
AAGGCTGAAT TTGGCGATGC GCTTTTCACG CTTCGTCTTG ATGTTCGCGA TCGACAAGCT
ATCGAGCACG CTATTGCCGA GCTGCCTGCC GAATGGCGTA CCATTGATGT ACTGGTCAAC
AATGCCGGGC TGGCACTGGG TTTGGAACCG GCCCACAAAG CGAATGTCGA TGACTGGGAA
ACCATGATCG ACACCAACAA CAAAGGTCTG GTGTTCATGA CCCATGCGCT ATTGCCGGAA
ATGGTGAAGC GCAATGTCGG CCATATTATT AATATCGGTT CCACTGCCGG CAACTGGCCT
TATCTGGGCG GGAATGTCTA CGGTGCCAGC AAGGCATTTG TACGTCAGTT CAGCCTGGGG
CTGCGTGCAG ACCTGTCCGG GACTCGGGTA CGCGTTACCA ATATTGAACC CGGTCTAGTC
GGCGGCACCG AGTTCTCCGC CGTGCGTTTT AAGGGGGATG AAGCCAAGGT GAGCCAGATC
TATGACAAAT CGAACCCGCT GACGCCGGAA GATGTCACAG AAGCCGTGTT CTGGGTGGCG
ACATTACCGG CTCATATCAA TATCAACACG CTGGAAATGA TGCCGGTCAG CCAGACCTAT
GGCGGCCTGA AAGTCAACCG TGACGAGTAA
|
|---|
| Protein sequence | MIILVTGATA GFGEAITRRF IKEGHQVIAT GRRQERLDAL KAEFGDALFT LRLDVRDRQA
IEHAIAELPA EWRTIDVLVN NAGLALGLEP AHKANVDDWE TMIDTNNKGL VFMTHALLPE
MVKRNVGHII NIGSTAGNWP YLGGNVYGAS KAFVRQFSLG LRADLSGTRV RVTNIEPGLV
GGTEFSAVRF KGDEAKVSQI YDKSNPLTPE DVTEAVFWVA TLPAHININT LEMMPVSQTY
GGLKVNRDE
|
|---|
| |