Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2072 |
Symbol | prfA |
ID | 8119549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2383225 |
End bp | 2384307 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644852459 |
Product | peptide chain release factor 1 |
Protein accession | YP_003004397 |
Protein GI | 251789676 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.132752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCTT CTATTGTTGC TAAACTGGAA GCGTTACAAG AGCGCCACGA AGAAGTGCAG GCGCTGCTGG GAGAACCCAG CGTGATTGCC GATATGGACC GTTTCCGGGC ATTGTCCCGC GAGTACGCGC AACTTACCGA CATTACCCGT TGCTTTCAGT GCTGGCAGCA GACGCAGGAT GACCTCGCCA CAGCTGAACT GATGCTGGAT GACCCGGAGA TGCGTGATCT GGCGCAGGAG GAACTCAAAG CGGCGAAAGC GGCCAGTGAA ACACTGGAAC AGCAACTGCA AGTGCTGCTG CTGCCGAAAG ATCCTGATGA TGAGCGTGGC TGTTTTCTGG AGATCCGCGC CGGTACGGGC GGTGACGAAG CCGCGTTATT TGCCGGCGAC TTGTTCCGTA TGTATAGCCG TTATGCCGAA TCCCGCCGCT GGAAGGTAGA AATCATGAGC GCGAGCGACG GCGAGCACGG CGGCTATAAA GAGATGATTG CCAAAGTCGT GGGCGACGGC GCTTACGGCC AGTTGAAATT CGAGTCCGGC GGGCACCGGG TGCAGCGCGT ACCCGCCACC GAATCGCAAG GGCGTATTCA TACCTCCGCC TGCACCGTGG CGGTCATGCC GGAAGTGCCG GAAGCGGAAC TGCCGGACAT CAACCCTGCT GATCTGCGAA TCGATACTTT CCGCTCCTCC GGTGCCGGCG GACAACACGT TAACACCACC GATTCCGCTA TCCGTATTAC TCATTTGCCG ACGGGCATTG TGGTGGAGTG CCAGGATGAG CGTTCGCAGC ACAAGAATAA AGCGAAGGCG TTATCGGTGC TGGCGGCGCG TATTCGTGCG GCGGAAATGC AAAAGCGCCA GCAGGAAGAA GCATCCACCC GGCGTAATCT GTTGGGCAGC GGCGACCGCT CCGATCGTAT CCGCACTTAC AACTTTCCGC AGGGAAGGGT GACCGATCAC CGCATCAACC TGACGCTCTA CCGTCTGGAC GAGGCGATTG AAGGTAAGCT GGATATGCTG ATTCAACCCA TCGTACAGGA ATATCAGGCC GACCAGTTGG CGGCGTTGGC TGAGCAGGAA TAA
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Protein sequence | MKSSIVAKLE ALQERHEEVQ ALLGEPSVIA DMDRFRALSR EYAQLTDITR CFQCWQQTQD DLATAELMLD DPEMRDLAQE ELKAAKAASE TLEQQLQVLL LPKDPDDERG CFLEIRAGTG GDEAALFAGD LFRMYSRYAE SRRWKVEIMS ASDGEHGGYK EMIAKVVGDG AYGQLKFESG GHRVQRVPAT ESQGRIHTSA CTVAVMPEVP EAELPDINPA DLRIDTFRSS GAGGQHVNTT DSAIRITHLP TGIVVECQDE RSQHKNKAKA LSVLAARIRA AEMQKRQQEE ASTRRNLLGS GDRSDRIRTY NFPQGRVTDH RINLTLYRLD EAIEGKLDML IQPIVQEYQA DQLAALAEQE
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