| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2064 |
|---|
| Symbol | |
|---|
| ID | 8119541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2375823 |
|---|
| End bp | 2376410 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644852451 |
|---|
| Product | peptidyl-tRNA hydrolase |
|---|
| Protein accession | YP_003004389 |
|---|
| Protein GI | 251789668 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
|---|
| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.460375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGGTA TCAAGTTAAT TGTAGGTCTG GCGAACCCCG GCGCGGAATA CGCCGCCACC
CGTCATAACG CCGGCGCCTG GTACGTTGAC CGCCTGGCGG AAGCCTACCG GCAACCGCTG
AAAGAAGAGA GTAAATTTTT CGGCTATACC GCACGCCTGT CGCTGGCGGG TAACGATGTG
CGCCTGCTGG TGCCCACAAC ATTCATGAAT CTCAGCGGTA AAGCCGTTGC GGCGATGGCA
ACCTTCTATC GCATCCAGCC CGATGAAATT CTGGTGGCGC ACGACGAACT TGACCTGCTG
CCCGGCGTCG CCAAACTGAA ACTCGGCGGT GGTCACGGCG GCCACAACGG GCTAAAAGAT
ATCGTCAGCA AACTCGGCAA CAATCCCAAT TTTCACCGTT TACGTATCGG CATCGGCCAT
CCGGGCGATA AAAACAAAGT GGTGGGATTC GTACTCGGTA AACCGCCCGT CAGCGAACAG
ACCCTGATCG ATCAAGCCAT CGATGAATCG TTGCGCTGTA CGGATATCCT GATGAAAGAA
GACATGATTA AGGCCATGAA CCGCCTACAT GCTTTCAAAG CGTCATGA
|
|---|
| Protein sequence | MSGIKLIVGL ANPGAEYAAT RHNAGAWYVD RLAEAYRQPL KEESKFFGYT ARLSLAGNDV
RLLVPTTFMN LSGKAVAAMA TFYRIQPDEI LVAHDELDLL PGVAKLKLGG GHGGHNGLKD
IVSKLGNNPN FHRLRIGIGH PGDKNKVVGF VLGKPPVSEQ TLIDQAIDES LRCTDILMKE
DMIKAMNRLH AFKAS
|
|---|
| |