Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2047 |
Symbol | |
ID | 8119524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2351012 |
End bp | 2351968 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644852434 |
Product | type II secretion system protein |
Protein accession | YP_003004372 |
Protein GI | 251789651 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0677944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGTG ATCCGGTGGT GTGGTTGGCG TTGCTGCTGA TTGCGCTTGG TATACGCATG GCGCTGAAAA GCCGCGCTCA CGCGCAAGTG CGGCGGCTGC GCGACCGTCT GGCGGCGCAT GTGGCGATGG CAGAAACCGC CGCCGTCGGC GCGCCGGACA GCATTCTGCG TAATCAGGGC AAGGCGTTGC CGCCGCGACT GGAAAAAATT CTGCAACCTA TCGCCGCCTG GGGAGTACAG CTAGCGGGGT CGGCGCGGGA TCGCCAGCAG TTGCGTCGTT TACTCGACCT GGCGGGGATC CGCCGTACTG AAGCGCTGGG TTGGCTGATG GCGGGCAAAC TGGGCGGCGG CCTGCTGCTG GCGCTGTTGC TGGTAGGGGG CGCCTTGCCG CCGCCGGATC GTACCGGCCT GATCGGGTTG GCGGCGGCGC TAATCGGCTT TTTCGCCGGC AGCCTGTTGC CGGAAGCCTG GCTGAAAATG CGCGCAGCCG GCCGTGGTGA AAAGCTGGCG CGTGCGGTGC CGGACGCACT CGATTTGATG GTGGTGTGCG CCGAAGCGGG TTTATCCATC GGCCGTGTTT TGCAGGTGGT ATCGAAAGAA CTCGGGCTTT CCTCGCCGGA AATGGCCGAC GAACTGCGCT ACACCGCCGC GGAGCTGCAA ATCCTGGCGG ATCGCAACAC CGCCTTGCAG CACCTTGCCG AGCGCACCCG CGTCAGTGAA ATCGAAAGCA TGGTGGCGAC GTTGCTACAG GCGGAACGCT ACGGCACGCC ATTGTCGCAG GCGCTGCGCA CCATTGCCGA TGAGAGCCGT AAAACCCTGT TGCTGACGCT CGAAGAGAAG GCAGGCAAAC TGCCGGCCCA ACTGAGTGTG CCGCTGATGG CGCTTATCCT GCCGCCCATT ATCGCCATTA TGGCGTCGCC TGCGCTGCTG CGCGTGGTCC GCCTGTTAGG CAATTAA
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Protein sequence | MFSDPVVWLA LLLIALGIRM ALKSRAHAQV RRLRDRLAAH VAMAETAAVG APDSILRNQG KALPPRLEKI LQPIAAWGVQ LAGSARDRQQ LRRLLDLAGI RRTEALGWLM AGKLGGGLLL ALLLVGGALP PPDRTGLIGL AAALIGFFAG SLLPEAWLKM RAAGRGEKLA RAVPDALDLM VVCAEAGLSI GRVLQVVSKE LGLSSPEMAD ELRYTAAELQ ILADRNTALQ HLAERTRVSE IESMVATLLQ AERYGTPLSQ ALRTIADESR KTLLLTLEEK AGKLPAQLSV PLMALILPPI IAIMASPALL RVVRLLGN
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