Gene Dd1591_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1983 
Symbol 
ID8119300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp2265472 
End bp2266428 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID644852373 
ProductPTS system, mannose/fructose/sorbose family, IIB subunit 
Protein accessionYP_003004311 
Protein GI251789590 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTATTG CCATCATGCT ATGCACTCAC GGCGCCACTG CCGGTCCGCT GTTAAACACA 
GCTGAAATGA TTCTTGGTGA ACAGAGTAAT GTGGGTTGGA TCGATTTTGT TCCCGGCGAA 
AACGCCGAGA TCCTGATGGA AAAATATCAG GCGAAACTGG CCGAACTGGA CACATCTGCA 
GGTGTACTTT TTCTGGTAGA CACTTGGGGA GGAAGTCCAT TCAATGCCGC CAGCCGTCTG 
GTAAATGACA AGAAAAATCA CGAAGTGATC GCCGGGGTCA ATATTCCTAT GCTGGCTGAA 
ACATTTATGG CCCGCGACGA CAACCCTGCA TTCGACGAAC TGGTCGCGAT CGCCGTGGAG 
GCCGGCCGGG CCGGCGTCAA AGCGTTGAAA GCGCATGAAC CGGAAAAAAT CGCGCATACG 
GCTCCCGTCA GCGCCAAACC GGTTGCGCCG CCGGGAGCCG GCGGACACAT GAAAATTGGG 
TTGGCGCGCA TCGACGACCG ACTGATCCAT GGGCAGGTCG CCACCCGTTG GACCAAAGAA 
ACCAACGTCA GTCGCATTAT CGTCGTCAGT GATGAAGTCG CCGCGGATAA CGTACGTAAA 
ACGCTGCTGA CACAGGTGGC TCCGCCCGGC GTTACGGCGC ATGTGGTCGA TGTCGCCAAA 
GCCGTCAGGG TGTATGACAA CCCGAAATAC GCGTCTGACC GCGTCATGCT GTTGTTTACC 
AATCCGACGG ACGTGCTGCG GTTGGTAGAA AGCGGCGTCA AGATTACCTC GGTCAACATC 
GGTGGTATGG CGTATCGGCA AGGCAAAACC CAGGTCAATA ATGCCGTTTC GATTGACGAC 
AAGGATATCG ACGCGTTCAA CAAGCTCCAC GCACGTGGCA TTGAGCTGGA AGTACGCAAA 
GTATCGACCG ATAGCAAAAT CAATATGATG GATTTGATCA CCAAGGCGGC GCGTTAG
 
Protein sequence
MSIAIMLCTH GATAGPLLNT AEMILGEQSN VGWIDFVPGE NAEILMEKYQ AKLAELDTSA 
GVLFLVDTWG GSPFNAASRL VNDKKNHEVI AGVNIPMLAE TFMARDDNPA FDELVAIAVE 
AGRAGVKALK AHEPEKIAHT APVSAKPVAP PGAGGHMKIG LARIDDRLIH GQVATRWTKE 
TNVSRIIVVS DEVAADNVRK TLLTQVAPPG VTAHVVDVAK AVRVYDNPKY ASDRVMLLFT 
NPTDVLRLVE SGVKITSVNI GGMAYRQGKT QVNNAVSIDD KDIDAFNKLH ARGIELEVRK 
VSTDSKINMM DLITKAAR