| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1978 |
|---|
| Symbol | |
|---|
| ID | 8119295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2261170 |
|---|
| End bp | 2261982 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644852368 |
|---|
| Product | rRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_003004306 |
|---|
| Protein GI | 251789585 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000355132 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTATC AATGTCCCTT ATGCCATCAG CCCCTGAATG CCGAGTCTGG CCGTTGGTCC
TGTGGACGTC ATCATTTTGA CTGCGCGCGG GAAGGGTATG TCAATTTACT GCCGGTGCAG
TTTAAACGCT CCAGACAACC AGGGGATAGC GCTGAAATGA TGCAAGCCCG CCGGACGTTT
TTGGATAATG GGCATTATCG GCCGCTACGG GATCGGGTAT CAGAGCAATT GGCGCGGGTA
TTGCAAAAAC AGCCGGGCGC GTTGTTGGAT ATTGGCTGTG GCGAAGGTTA TTACACCGCT
GCGTTGGCAG ATACACTCGC CCCTGATGGG ATGCCGGTTT ATGGGCTGGA TGTCTCCAAA
GCGGCAATTC AGCGCGCAGC CAGGCGCTAT ACTCAAGTCA TGTTTTGTGT GGCTTCCAGT
CAACGACTCC CTTTCCAGGA TCGTTCTCTG GCGGCGGTAT TAAAAATCTA TGCTCCCTGC
AATGGTGAGG AACTGGCGCG GGTTATTCGG CCGGGAGGGG GCGTCATGAC CGTGTCGCCG
GGGCCGAATC ATCTGTTGTC GCTTAAAGCG TGGGTATACC AGGATGTCAG GCCCCATCCT
GAGATAGACG AAGTCTTGCC GGGATTTGTG CTGGAAACCG CCGAGCGTTT ACAGTACCGC
ATGTCGATGA CAGGCGCGGA TGCCGCCTGC CTGTTGCAAA TGACGCCATT TGCCTGGCGG
GCAACCCCGG AAGTGAGTGA TGGGTTGATG GCTGAATCGC AGTTTGAATG CGAAACGGAT
TTTCTGATTC GCTTTCATCG GCGAGAGGAT TAA
|
|---|
| Protein sequence | MPYQCPLCHQ PLNAESGRWS CGRHHFDCAR EGYVNLLPVQ FKRSRQPGDS AEMMQARRTF
LDNGHYRPLR DRVSEQLARV LQKQPGALLD IGCGEGYYTA ALADTLAPDG MPVYGLDVSK
AAIQRAARRY TQVMFCVASS QRLPFQDRSL AAVLKIYAPC NGEELARVIR PGGGVMTVSP
GPNHLLSLKA WVYQDVRPHP EIDEVLPGFV LETAERLQYR MSMTGADAAC LLQMTPFAWR
ATPEVSDGLM AESQFECETD FLIRFHRRED
|
|---|
| |