Gene Dd1591_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1789 
Symbol 
ID8117272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2050413 
End bp2051768 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content56% 
IMG OID644852181 
Productsensor protein RstB 
Protein accessionYP_003004119 
Protein GI251789398 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TGTTTATTCA GTTCTTTCTG CTGCTGTTCG CCAGTTTTCT GGTGATGACG 
TTACTGGTGG GGTTGGTGTA CAAGGTCACC GCAGAGCGGG CCGGTCGACA GTCGATGGAC
GACTTGATGA AAAGCTCGCT CTACCTGATC CGCAACGAAC TGCGTTCTAT TCCGCCGCGC
GAGTGGCATA AAACAATCAA CCAGATGGAC CTCAACCTGT CGTTCAAACT GCACATTGAG
CCCATCAGCA AATACCGGCT CAGTACTCAG GCCCAGCAAC GGTTGATTCA GGGGGAAATT
GTCGCGCTGG ACGACGAGTA CACCTTCATC CAGCGTATTC CGCGCAGCCA TTATGTGCTG
GCGGTCGGCC CGATACCCTA CCTGTTCTTC CTGCACGAAA TCCGGCTGGT TAACTTGCTG
TTTCTGGCGC TCATCGGCCT GTCGCTGGCG CTACCGGTAT TTCTGTGGAT GCGGCCGCAC
TGGAGAGCGA TGCTGCAACT GGAAAGTGCG GCGCAGCGAC TGGGCGACGG CCATCTGGAA
GAACGGACCC ACTTCGATAA CACCTCCAGC CTGTTCCGCC TCGGCGTCGC GTTCAACCGC
ATGGCTGATA ATCTCAACCA ATTGATTACC AGTAAAAAAC AGCTGATCGA CAATATTGCC
CACGAGTTAC GTACGCCGCT GGTACGGTTG CGCTACCGGC TGGCGATGAG CGATAACCTG
ACCGATGAAG AACAGGAAGC GATCAACCGC GATGTCGGCC AGTTGGAAGC GCTTATCGAT
GAATTGCTGA CCTACGCCCG CCTCGACAGG CCGCAGGTGA CGCTGCATCT GGAAGAAATC
GACCTGCCGC AATGGCTGCA AAAACGCGTC GACGATTTCC GGCTGGTACA CGATAACAAG
CTGATTGAGC TGGACGTGGC GAGCGGCAAC CATTTCGGTT ATGTCGACCT GCGCCTGATG
GAGCGGGTGT TGAACAATCT GGTCAATAAC GGTTTACGAT TCTGTCGGCA ACGCCTGCGC
GTAAGTTTGA CGCTCGATCA ACACACCGCC TGCCTGCAAG TGGAAGATGA CGGGCCGGGT
ATTGCACCGG AAGATCGCTC GCATATTTTC GAACCCTTCA TCCGTCTGGA AGCCGGCATG
GAAAACAGCA GCGGCGGCTG CGGCCTCGGG TTGGCCATCG TCCAGGCCAT CGTGCGGGCT
TACAACGGCA CTATCGACGT CGACAGCAGC CCGCTGGGCG GCGCCCGCTT CCAGTTTCGC
TGGCCGATCG TCGAATACAA ACCATCGTTG AATTCTTCGT CTGCGAACCT TGTACAATCC
GTTACACGCG GAAACCAATC ACTCACAGAT CGTTAG
 
Protein sequence
MKKLFIQFFL LLFASFLVMT LLVGLVYKVT AERAGRQSMD DLMKSSLYLI RNELRSIPPR 
EWHKTINQMD LNLSFKLHIE PISKYRLSTQ AQQRLIQGEI VALDDEYTFI QRIPRSHYVL
AVGPIPYLFF LHEIRLVNLL FLALIGLSLA LPVFLWMRPH WRAMLQLESA AQRLGDGHLE
ERTHFDNTSS LFRLGVAFNR MADNLNQLIT SKKQLIDNIA HELRTPLVRL RYRLAMSDNL
TDEEQEAINR DVGQLEALID ELLTYARLDR PQVTLHLEEI DLPQWLQKRV DDFRLVHDNK
LIELDVASGN HFGYVDLRLM ERVLNNLVNN GLRFCRQRLR VSLTLDQHTA CLQVEDDGPG
IAPEDRSHIF EPFIRLEAGM ENSSGGCGLG LAIVQAIVRA YNGTIDVDSS PLGGARFQFR
WPIVEYKPSL NSSSANLVQS VTRGNQSLTD R