Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1752 |
Symbol | |
ID | 8116835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2004844 |
End bp | 2006592 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644852145 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003004083 |
Protein GI | 251789362 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGTACA CTCTGTGTAT TGCCGATTGT CTGAAAAAAA ACCGTATGTC CGGAAAACAC CTTCTGATAC TGGCGCTGGC CTGGCTGACG CAGCCCGTTA TGGCACAGAT GCCGACCGTC CCCGCGGCGC CGGCGCAAAC TATCCGCCAG AGCGGTTTTG TCTATTGCGT CAATGATGTG CTCAGCACCT TTAACCCACA AATGTCGCGC AGCGGGTTGA TGGTGGACAC GCTGGCCGCG CAGCTTTATG ACCGCTTGCT GGGCGTCGAT CCTTACACTT ACCGCTTGAT GCCGGAACTG GCGCAACACT GGGATGTCAG CGATAACGGC TCGACCTACC GCTTTACCTT GCGTCGCGAT GTGCCGTTCC AGCAAACCGC CTGGTTTACC CCCAGCCGGA TGCTGAACGC CGACGACGTG CTGTTCAGTT TCCAGCGGAT GCTGGACAAA AAGCACCCGT TCCACGACAT CAACGGCGGC GAATACCCCT ATTTCGATAG CTTGCAACTG GCCGACAACG TGCAAAGTAT TCGCAAGCTG GGCGATTACA GCATCGAGAT CCGTTTGAAC AGCCCGGATG CGTCGTTCCT GTGGCATCTG GCGACCCACT ATGCGCCTAT CCTGTCGGCG GAATACGCCC AGCAATTGAC CCGACAGGAT CGTCGTGAAC TGCTTGACCG TCAACCGGTA GGCACCGGCC CTTATCGACT GGAGCAATAC CGCTATGGTC AGTATGTGCG CCTGAAACGC AACGACGATT ACTGGCGCGG TCGGCCACGT ATGGAACAGG TGGTGGTGGA CCTCGGCGCC GGCGGCACCG GCCGACTGTC CAAGCTGTTG ACCGGCGAAT GCGACGTGCT GGCCTACCCG GCCGCCAGCC AACTGAGCAT TCTGCGTAAT GACCCGCGCC TGCGCTTGTC GCTGCGCCCG GGGATGAACG TCGCCTATCT GGCGTTTAAC GTGCGCAAAC CGCCGTTGGA TGATGCTCGC GTGCGTCACG CCGTTGCGCT GGCGATCAAC AATGATCGCC TGATGCAGTC GATTTACTAC GGCACCGCGG AAACCGCCGC GTCGATTTTG CCGCGCGCGT CCTGGGCTTA CGACAATGAG GCGCAGGTTA CCGAGTACAA CCCGGAAAAA GCGCGTCAGT TGCTCAAAGA ACTGGGCATT ACCCATCTAC AGTTACAGTT GTGGGTGCCG AGCGCGTCGC AATCCTATAA CCCCAGCCCG GTCAAGACCG CCGAATTGAT TCAGGCCGAC CTGGCTCAGG TGGGTATCCA GGTCACCATC GTGCCGGTAG AGGGCCGTTT TCAGGAAGCA CGGCTGATGG AAATGAACCA CGACCTGACG CTGGCAGGCT GGGCGACCGA CAGTAACGAC CCGGACAGCG TATTCCGGCC GTTGCTGAGT TGCGCCGCTA TTCGCTCCCA GACCAACTAT GCTCATTGGT GCGATCCCGT TTTCGATCAG GTGCTGCAAG ATGCACTCTC TTCCCAGCAG CTCTCGCGGC GTATGGAATA CTATCGGGTC GCGCACCATA TTCTGGCCGA ACAGTTGCCG GTGCTGCCGC TAGCCTCGTC ATTGCGGATG CAGGCGTACC GCTACGACAT TAAAGGACTG GTACTTAGCC CGTTCGGGAA TGCCTCCTTC GCCGGCGTTT ACCGTGATGA AGGCAATCAA GAAAAACCGA ATGACCGCGC CGTTGTTGAC CCATCGTCCA GCACGCCGAT TCAGGGAGAG CAACCGTGA
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Protein sequence | MRYTLCIADC LKKNRMSGKH LLILALAWLT QPVMAQMPTV PAAPAQTIRQ SGFVYCVNDV LSTFNPQMSR SGLMVDTLAA QLYDRLLGVD PYTYRLMPEL AQHWDVSDNG STYRFTLRRD VPFQQTAWFT PSRMLNADDV LFSFQRMLDK KHPFHDINGG EYPYFDSLQL ADNVQSIRKL GDYSIEIRLN SPDASFLWHL ATHYAPILSA EYAQQLTRQD RRELLDRQPV GTGPYRLEQY RYGQYVRLKR NDDYWRGRPR MEQVVVDLGA GGTGRLSKLL TGECDVLAYP AASQLSILRN DPRLRLSLRP GMNVAYLAFN VRKPPLDDAR VRHAVALAIN NDRLMQSIYY GTAETAASIL PRASWAYDNE AQVTEYNPEK ARQLLKELGI THLQLQLWVP SASQSYNPSP VKTAELIQAD LAQVGIQVTI VPVEGRFQEA RLMEMNHDLT LAGWATDSND PDSVFRPLLS CAAIRSQTNY AHWCDPVFDQ VLQDALSSQQ LSRRMEYYRV AHHILAEQLP VLPLASSLRM QAYRYDIKGL VLSPFGNASF AGVYRDEGNQ EKPNDRAVVD PSSSTPIQGE QP
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