| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1722 |
|---|
| Symbol | |
|---|
| ID | 8116805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1971158 |
|---|
| End bp | 1971595 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644852115 |
|---|
| Product | transcriptional regulator SlyA |
|---|
| Protein accession | YP_003004053 |
|---|
| Protein GI | 251789332 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00118206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGC CGTTAGGTTC TGATTTAGCC CGGTTGGTTC GTGTATGGCG TGCTTTGATT
GATCATCGAT TGAAGCCGCT AGAGCTCACT CAGACACACT GGGTCACATT GCATAATATT
CACCAACTGC CTCCGGGGCA GTCCCAAATT CAGCTTGCCA AAGCGATAGG AATAGAACAG
CCTTCGCTGG TGCGTACATT AGATCAACTG GAAGACAAGG GGTTAATTAC CCGACACATT
TGCGCCCATG ATCGTCGTGC CAAGCGAATC TTGTTAACAG ATATGGCGGA TCCTATCATT
CAGGCCGTTA ATGATGTTAT TGATCAGACA CGCTGTGAAA TATTAAATGG CATTACCCCT
GAGGAAGTGG ATGAGTTAGC CACTATTATC TCTCGGCTGG AAAAAAACAT ATTGGCATTA
CACGAGAGCC AGTCTTAA
|
|---|
| Protein sequence | MELPLGSDLA RLVRVWRALI DHRLKPLELT QTHWVTLHNI HQLPPGQSQI QLAKAIGIEQ
PSLVRTLDQL EDKGLITRHI CAHDRRAKRI LLTDMADPII QAVNDVIDQT RCEILNGITP
EEVDELATII SRLEKNILAL HESQS
|
|---|
| |