Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1697 |
Symbol | |
ID | 8117898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1942556 |
End bp | 1943848 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644852089 |
Product | FeS assembly protein SufD |
Protein accession | YP_003004029 |
Protein GI | 251789308 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.294615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGGCT TACCGACCAA CAGTAAAGCG CAGCAGGCGC TGCAACAGTG GCAACGCCTG TTTGATACCG CCGCGCCGCG CGCCGATGAC GCGCGGCAGC ACTGGCAACA GGTGAAGCAA CTGGGGATTC CTCACCGCAA GCTGGAACAC TGGAAATACA CCCCGCTGGA GCAGTTTCTT GAGCATGAAT TCACCACGAC CGTGACCGAC ACCGAGGTGA CGCCGGCGCA GTGCGACGCG CTGGCGTTGC CGGTCGACGG CTGGCGGCTG GTATTTGTCG ACGGGCGCTT GTGCCGCGCG CTGAGCGATG CCGACAGCGG GCCGTATCAG GTGGAGGTGC TCTCATCTTC CCGGCGACAG TCTGGTTTAG CGCCGATTCA GCCCGAGGTC TTTCTGCACC TGACGGAGAG CCTGGCGGTA GAACAAACGC TGATTCAGGT CGGCAACGGG GTGATAGCGG AAAAACCGCT TTACCTGCTG CATATCAGCA GTGGTCAGCC GGCGGCGCTC AACACATTGC ACTATCGCCA CCATGCACGT ATCGGCGCAG GCGCCAGCGC GACGCTGATT GAGCATTACG CAAGCCTGGC GGGGGCTGCC CATTTTAGCG GCGCGCGCCT GACCATCGAC GCCGGTGAAA ACAGCGTTGT CGAGCACTAC AAGCTGGGGT TTGAAGCGAC TGACAGTTAT CACTTTGCTC ACAACGATTT ACGCCTGGCC CAGGCTGCCC AACTGCACAG CCACAGTTTT CTGCTGGGCG CGGGGCTGAC CCGCCACCAC ACCAGCGCGC AGATGAACGG TGAAGGCGCG ACGCTGTCGA TGAACAGCCT GATGGTGCCG ACCGGCAACG AAGTATGCGA TACCCGTACG TACTTGGAAC ACAATCAAGG GTTCGGTGAA AGCCGTCAGT TGCACAAAGC GATTGTGCGT GATCGTGCTC GCGGCGTGTT CAACGGGTTG ATCAAGGTGG CTCCCGGCGC ACTGAAGACA GACGGTAAGA TGACCAACAA CAACCTGTTG CTCGGGCGAC TGGCGGAGGT GGATACCAAA CCTCAGTTGG AAATCTACGC CGATGATGTG AAATGCAGTC ACGGTGCGAC GGTTGGGCGT ATCGACGAAG ATCAACTGTT TTATCTGCGG TCACGCGGTA TCGGCGAGCA GGCGGCGCAA CAGATGATTA TCTTCGCGTT TGCGGCCGAA CTGACGGAAG CTATCCATGA TGACAGGCTA CGTGATGCGG TGCTGGCGCG TGTTGCCCAG CGCTTGCAGG CACTGGGAGG AGAAACAGCG TGA
|
Protein sequence | MAGLPTNSKA QQALQQWQRL FDTAAPRADD ARQHWQQVKQ LGIPHRKLEH WKYTPLEQFL EHEFTTTVTD TEVTPAQCDA LALPVDGWRL VFVDGRLCRA LSDADSGPYQ VEVLSSSRRQ SGLAPIQPEV FLHLTESLAV EQTLIQVGNG VIAEKPLYLL HISSGQPAAL NTLHYRHHAR IGAGASATLI EHYASLAGAA HFSGARLTID AGENSVVEHY KLGFEATDSY HFAHNDLRLA QAAQLHSHSF LLGAGLTRHH TSAQMNGEGA TLSMNSLMVP TGNEVCDTRT YLEHNQGFGE SRQLHKAIVR DRARGVFNGL IKVAPGALKT DGKMTNNNLL LGRLAEVDTK PQLEIYADDV KCSHGATVGR IDEDQLFYLR SRGIGEQAAQ QMIIFAFAAE LTEAIHDDRL RDAVLARVAQ RLQALGGETA
|
| |