Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1665 |
Symbol | |
ID | 8117866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1897728 |
End bp | 1898858 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644852057 |
Product | porin Gram-negative type |
Protein accession | YP_003003997 |
Protein GI | 251789276 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000257252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGC GTAATATTCT GGCAGTGGTT ATCCCGGCAC TATTGGCCGC TGGTGCAGCT AACGCGGCGG AAGTTTACAA CAAAGACGGT AACAAGCTTA ACCTGACCGG CAAAATTGAC GGCCTGCATT ACTTTTCTAA AGACGACAAT AACCGTGGCG ACCAGACTTA TGCACGACTG GGCTTCACAG GTGAAACTAA AATCAACAGT GATCTGACCG GTTATGGTCG TTTTGAATAC CAATTCAACG CAAGCAAAGC TGAAGATACC AACGCCAGCA GCAGCAAAAC TCGCTATGCA TACGCTGGCC TGAAATTTGG TGATTTTGGC TCTATTGATT ACGGCCGTAA CCGCGGCCCC GCTTACGATG GGGTATCCTA TACGGACGTT CTGCCAGAGT GGGGTGGAGA TTCAGTTTAC ACTGATAATA TCAATGGCCG TAGTGCTGGC GTGGCAACCT ATCGTAACAA GAACCTCTTT GGCCTGGTTG ACGGTTGGAA CTTTGCTTTG GGATATCAAT CAGAGCATAC CGACTCCACA GATATGGCAA AACAGACCGG CGCCGGCTGG TCGGCATCAA CATCCTATGC AACTCCGTTT GGTGTGAGTG CAGTAGCTTC CTATGCACAT GCCAATCGTA CCGATAGTCA AGTTCTGGAT GGTCGTGGTA AAGATGTCGA ACTGTGGGCG ACTGGCTTAA AATACGATGC CAATAGCATC TATGTAGCAG CTACTTATGG TGAATACCAT AACTTAAGTT ATACCAGGAA ACATACTTTC CAGACGGGCA CCACTGCAAC ACTTAACAGC AACGGAACCA TTTCATCCAC AGCTGTTACC CAGAAATCCG CTTTTGATAA GACCAAAGTA TTAGAAGCTG TTGCCCAATA TAGCTTCGAT TTCGGCCTGA CGCCGTCCGT AGGTTATGTG TCTGCTAAGG CTGATGATGA TACCGCCGCT ACCCATAGCA GTGACTATAT CACTAAGTAT GTCAGCCTCG GCTTGACTTA TGCCTTCAAT AAGAATTTCT CTACTTATAC CGAGTACGAT ATTAACCTGA TCGATACCAA TAACGCCTAT GGCCTGAACA CCAACGACCG CGTTGCTGTA GGTGTGGTCT ACCAGTTCTA A
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Protein sequence | MMKRNILAVV IPALLAAGAA NAAEVYNKDG NKLNLTGKID GLHYFSKDDN NRGDQTYARL GFTGETKINS DLTGYGRFEY QFNASKAEDT NASSSKTRYA YAGLKFGDFG SIDYGRNRGP AYDGVSYTDV LPEWGGDSVY TDNINGRSAG VATYRNKNLF GLVDGWNFAL GYQSEHTDST DMAKQTGAGW SASTSYATPF GVSAVASYAH ANRTDSQVLD GRGKDVELWA TGLKYDANSI YVAATYGEYH NLSYTRKHTF QTGTTATLNS NGTISSTAVT QKSAFDKTKV LEAVAQYSFD FGLTPSVGYV SAKADDDTAA THSSDYITKY VSLGLTYAFN KNFSTYTEYD INLIDTNNAY GLNTNDRVAV GVVYQF
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