| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1649 |
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| Symbol | lolD |
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| ID | 8117850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1879660 |
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| End bp | 1880367 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644852041 |
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| Product | lipoprotein transporter ATP-binding subunit |
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| Protein accession | YP_003003981 |
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| Protein GI | 251789260 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.473335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAATT CACCTTTATT ACAGTGCCGT CAGCTGTGTA AACGCTACCA GGAAGGCAAC
CTGTCTACCG ATGTGCTGCG TGATGTGTCG TTCGACATGC AGAAAGGCGA AATGATGGCG
ATTGTCGGCA GTTCCGGCTC AGGTAAAAGT ACCTTGTTGC ATTTGCTGGG CGGGCTGGAT
GCGCCGACCT CCGGCGAGGT GGTGTTTCAG GGTAAGACGT TGAATCAACT GTCGGCGGCG
GCGAAAGCTG CGCTGCGTAA CCGCGAACTG GGGTTTATCT ATCAGTTTCA TCATCTGCTG
CCGGATTTCA GCGCGCTGGA AAATGTGGCG ATGCCGCTGC TGATCGGCAA TGTGGCGCCG
AAAGAGGCCA AAGAGCGGGC GCAGACCATG CTGGCGGCGG TCGGTCTGGC GCAGCGCAGT
CAGCACCGCT CCTCGGAACT GTCCGGCGGC GAGCGCCAGC GTGTGGCGAT TGCCCGTGCG
CTGGTGAATA ACCCATCGCT GGTGCTGGCG GACGAACCGA CCGGCAACCT TGATCAGCGT
ACTACCGATG CGATTTTTGA ACTGTTGGGC GAGCTGAACG TCCGTCAGGG GACGGCATTT
TTGGTGGTGA CGCATGACCT GCGTCTGGCC GGCCGTCTCG GCCGGCAGTT GGAAATGCGC
GACGGCCAGT TGCAGCAGGA GTTAACCCTG ATGGGGGCGT CGCAATGA
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| Protein sequence | MSNSPLLQCR QLCKRYQEGN LSTDVLRDVS FDMQKGEMMA IVGSSGSGKS TLLHLLGGLD
APTSGEVVFQ GKTLNQLSAA AKAALRNREL GFIYQFHHLL PDFSALENVA MPLLIGNVAP
KEAKERAQTM LAAVGLAQRS QHRSSELSGG ERQRVAIARA LVNNPSLVLA DEPTGNLDQR
TTDAIFELLG ELNVRQGTAF LVVTHDLRLA GRLGRQLEMR DGQLQQELTL MGASQ
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