| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1615 |
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| Symbol | |
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| ID | 8118136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1839286 |
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| End bp | 1842462 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644852007 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003003947 |
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| Protein GI | 251789226 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000319313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TGTTGATTAA CGCAACTCAA CAGGAAGAGT TGCGTGTTGC CTTGGTTGAT
GGTCAGCGGC TCTATGATTT GGATATTGAA AGCCCCGGAC ACGAGCAAAA AAAGGCAAAC
ATTTACAAAG GCAAAATCAC CCGCATTGAA CCTAGCCTTG AAGCCGCTTT TGTTGATTAC
GGCGCAGAGC GACACGGCTT CCTTCCTCTC AAAGAAATCG CCCGCGAATA CTTCCCAAGC
AATTACAACT CTCACGGTCG TCCGAACATC AAAGACGTGC TGCGTGAAGG TCAGGAAGTT
ATCGTTCAGG TGGATAAAGA GGAACGCGGC AACAAAGGCG CCGCTTTAAC CACTTTTATT
AGTCTCGCCG GCAGCTATTT GGTATTGATG CCAAACAACC CACGCGCAGG CGGTATCTCC
CGTCGTATCG AAGGCGATGA CCGTACCGAA CTGAAAGAAG CGTTGGGCTC ACTGGAACTG
CCGGATGGGA TGGGCTTGAT CGTCCGTACC GCCGGGGTAG GTAAATCCGC CGACGCATTA
CAGTGGGACC TGGCGTTTCG TCTGAAGCAC TGGGAGGCTA TCAAAAAAGC AGCGGAAGGC
CGCTCGGCGC CATTCCTGAT TCATCAGGAA AGCAACGTGA TTGTCCGCGC GTTTCGTGAC
TATTTGCGCC CGGACATCGG TGAAATTCTG ATCGATAATC CCAAAATTCT GGAGCTGGCT
AAAGAGCATA TCGCTGCGCT GGGTCGCCCG GATTTCAGTA GCAAAATCAA ACTGTATACC
GGTGAAATTC CGCTGTTCAG CCATTATCAG ATTGAATCGC AGATAGAGTC CGCCTTCCAG
CGTGAAGTGC GTCTGCCTTC GGGCGGCTCC ATCGTCATCG ATACCACCGA AGCGCTGACC
GCTATTGATA TCAACTCCGC CCGGGCAACT CGCGGCGGCG ACATTGAAGA AACCGCATTC
AACACCAACC TGGAAGCTGC CGATGAAATC GCTCGCCAGT TGCGTCTGCG CGATTTGGGT
GGTTTGATTG TCATCGACTT CATTGACATG ACTCCGGTTC GCCATCAACG TGAGGTGGAA
AACCGCCTGC GTGACGCGGT ACGCCAGGAT CGTGCCCGTA TTCAGATTGG CCGTATTTCC
CGCTTTGGCC TGCTGGAAAT GTCACGCCAG CGCTTAAGCC CGTCGCTGGG TGAATCCAGC
CACCACGTCT GTCCACGCTG TAGCGGCACC GGCACTATTC GTGACAATGA ATCACTGTCG
CTGTCTATCC TGCGCCTGAT TGAAGAAGAA GCGCTGAAAG AAAACACCAA AGAAGTCCAT
GCGATTGTAC CGGTGCCTAT CGCGTCTTAT CTGCTTAACG AAAAACGCGA AGCCGTCAAT
GCAATCGAAA AACGTCAAGG CGGCGTTCGC GCTATTATCG TGCCGCATGA TGGGATGGAA
ACGCCGCACT ACTCCGTGCT GCGCATCCGC AAAGGTGAAG AAAAACAAAC CCTGAGCTAC
ATGTTGCCTC AGTTACTGGA TGCTGAATCT CAGCAGGTAA CGGAAGAGCA AGTCGCTGAA
CGCCGTGCAC CCGAACAACC AGCGCTGGTT TCGTTCACTA TGCCGGATAT TCCGCCCGAT
GAAGCCAAAT CGACGGTGGT CACGGCGACT CCGCCTGCCG CAGCCAAACC CGCTGTTCCT
GAACGGGGTT TGTTCGGACG TTTTATCGGC GCCCTGAAGG GGATTTTCGC ATCATCCGAC
GACGGCAAAG ACCAGCAGCC TGCCGATACC GCTAAAGCGG AATCCGACGA GCAGGAGCAA
AGGCCGGAAC GTCGGAACAA TCGCCGTCAG TCCGGCCGTC GGGATCGTCC TCGCGACAAT
CGCGAACCGC GTGAACGTGA TGAGCAGCGT CGTAACAAAC GCGTACAGCA GCAGAATGCA
GACGTTGAAA ACGCCCCTGT AACGGATACG TCGGTTCAGG ATAAAGCCGT ACGTGATGAG
CAACGCCGCG AACAACGCGC TGAGCGTCAG CGTCGCCGCC AGGAAGAAAA ACGTCAGGCG
CAGGGTGAAG TCAAAGAACT GAACAATGCC GCCGCCGAGA CAGAAGATGT TGTTACCGAA
CAGGAAAAAC CAGCACAGGT AATGCCGCGT CGTCAACGCC GCCAGTTGAC CCAAAAAGTA
AGGATTGAAG AGAGTAACGC CACAGGAGAA GACGCTGGCG CAGCACCTCT TGCCGTTACG
TACGTGCCAT CTTCTCAGGC AGAAGAAACG CAGGAGTCCG TTGCTCCGGT CACGGATGTC
GCGGATACGG AGAATGATGT TGCCGCAACG GAAAACAGCC GTGAAAATGG CTTGCCTCGC
CGTTCCCGTC GTTCACCTCG TCATCTGCGT GTCAGCGGTC AACGCCGCCG TCGCTACCGT
GATGAGCGCT ACCCGACGCA ATCACCGATG CCACTGGCGC AAGCTTCCGC CTCACCGGAA
ATGGCTTCAG GTAAAGTTTG GGTTCATTAC CCAATCGCAC AGCCGCAACA GGCGGAATGG
ATTGAAGAAA GTACCGCTAC GCCTGCCGAC GACGTGCAGC ACTCTGCCGC GCCGGAACTC
GCCGCTGCAG CGGTGTTGAC CGAGGTTGCA GAGGTTGTGG CCGCAACGCC TGCAAGCACT
CCAATCGTAG AAGCACCGGC ATCGTCTCCA ACACAGCAGG ATTCAACCGA ATCCAGCAGC
GATACTCAGC CTGCCGAAGC CAATGTGCCG GAACAGGCTC AGGAAGACAT ATCGCCGTCT
ACGGAGACTC AGACGCCTGC GCCTCAGGTT GTAGATAAGA TTGCCGATGC TGGAGAAACG
CCTGCTGATG CTGTTCCGGA TAATGAGACC GTAGCCGACG GCGATGAATC CATAGAGGCT
CAGGTCGCTG AACAACCACT GGTGACTCAA GCTCAGGAAC AGGCCGAGAT CACGCCCGTA
GCCGAAGAGC CTGCCGTTAC GCCGGCGCTT GTCGAGAGTG TCTCTGTTGT GGTAGCGACG
AGTCAGCATC ACGCCACTGC GCCAATGACG CGTGCACCGG CTCCGGCATA CATTCCGGAT
GCTCCACGCG TGAGTGACTG GCAGCGCCCG GCGTTTGAAT TTACAGGCAA AGGTTCCGCA
GGTGGTCATG CTGCCGTTAA TCAAGCCAGC GCACCCGCAA CCCGCCCTGT AGAGTGA
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| Protein sequence | MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY
GAERHGFLPL KEIAREYFPS NYNSHGRPNI KDVLREGQEV IVQVDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALGSLEL PDGMGLIVRT AGVGKSADAL
QWDLAFRLKH WEAIKKAAEG RSAPFLIHQE SNVIVRAFRD YLRPDIGEIL IDNPKILELA
KEHIAALGRP DFSSKIKLYT GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDTTEALT
AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQREVE
NRLRDAVRQD RARIQIGRIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTIRDNESLS
LSILRLIEEE ALKENTKEVH AIVPVPIASY LLNEKREAVN AIEKRQGGVR AIIVPHDGME
TPHYSVLRIR KGEEKQTLSY MLPQLLDAES QQVTEEQVAE RRAPEQPALV SFTMPDIPPD
EAKSTVVTAT PPAAAKPAVP ERGLFGRFIG ALKGIFASSD DGKDQQPADT AKAESDEQEQ
RPERRNNRRQ SGRRDRPRDN REPRERDEQR RNKRVQQQNA DVENAPVTDT SVQDKAVRDE
QRREQRAERQ RRRQEEKRQA QGEVKELNNA AAETEDVVTE QEKPAQVMPR RQRRQLTQKV
RIEESNATGE DAGAAPLAVT YVPSSQAEET QESVAPVTDV ADTENDVAAT ENSRENGLPR
RSRRSPRHLR VSGQRRRRYR DERYPTQSPM PLAQASASPE MASGKVWVHY PIAQPQQAEW
IEESTATPAD DVQHSAAPEL AAAAVLTEVA EVVAATPAST PIVEAPASSP TQQDSTESSS
DTQPAEANVP EQAQEDISPS TETQTPAPQV VDKIADAGET PADAVPDNET VADGDESIEA
QVAEQPLVTQ AQEQAEITPV AEEPAVTPAL VESVSVVVAT SQHHATAPMT RAPAPAYIPD
APRVSDWQRP AFEFTGKGSA GGHAAVNQAS APATRPVE
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