| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1598 |
|---|
| Symbol | |
|---|
| ID | 8118119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1818988 |
|---|
| End bp | 1820718 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644851991 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003003931 |
|---|
| Protein GI | 251789210 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1067] Predicted ATP-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000947515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCAGTA ACCGACTCGA ATGGCAGCAA TTGCTGCCCG ATCATGCGCC ATATCAAACA
TTATTCTCCC AGGCCGCTCA GTTGGCTCCT GCAGAATTCT CCGCAGTCCA ACCCCGACTG
GCCGATGCAT TGACGATTTT CTGTCATCCT CGCTCGCCAT CTCAGTTCAT GCTGCTGAAA
GCGCAGGAGA ATAATGCTTA TCTCGCATTG ATTGCCAATG CCATCGCTCA TTTGCCGGCC
CGGCAACCAG AGACGTTGCA CGGCTATCGT TATCATATTG ACGGCCGTCA GATCAGTATT
CAGCCGGCTC AATATCCAGA TGACAATTTT GCGGCTACGC TGCGTAGCGG CTATCAGGAG
TGGATCGAGC CAGAACAGCT GTTCGGCTGT GTGCGGGTGT ATAAAGACGA CATCAGCCTG
CAACCCGGCC TGATCCACCG TGTAAACGGC GGTACGCTGA TTCTGTCGGC ACGAACATTG
CTGGCGCAAC CGCTGATGTG GCTACGGCTT AAGCAAATCA TTATCGATGG TCAGTACCAC
TGGCTATCTC CCGATGAGCG GCAACCATTA CCGGTATCGA TTCCACCGGT GCCGATTGAC
CTGCGTCTGG TCGTAGTTGG CGATCGAGAA AGTCTGGGCG ATATTCACGA CATGGAGCCC
GAGCTGGGCG AACTGGCAAT CTATGGTGAA TTTGAATCAC ACCTGCAATT GATCGAACCC
GAAGATATGG TGCACTGGTG TTCGTACATC AATGCGCTAT GTCTGGAAAA TCAACTGCCG
TTGCTGGCCG CAGACGCCTG GCCGGAATTG TTCACGCTGG CGGTACGTTA TAGCGGTGAT
CAGGGCAGTG TTCCATTATG TCCGCAATGG CTGACTCACC AGCTCAAACA CGCAGCGTTG
TATACGCGTC AGGAAGACAT TACCGGACAA GCGATTATTG ATGCCGTGAC TACGCGCCGT
TGGCGGGAAG GCTATCTGTC CGAACGTATG CAGGATGAAA TCGAACTCGG CCAAGTGTTG
ATCGAAACCG AGGGCGAGAT CATTGGTCAA GTGAATGGCT TGTCTGTACT GGAGTATCCC
GGTTACCCAC TGATGTTCGG CGAACCAACC CGCATCAGCT GTGTGGTACA CCCCGGCGAC
GGCGAGTTAA CCGATGTTGA ACGCAAAGCC GAGCTGGGTG GCAACCTACA TGCCAAAGGC
ATGATGATCA TGCAGGCTTT TCTGATTTCT GAATTGGAAC TGGAGCAACA ACTGCCTTTT
TCTGCCTCGA TCGTGTTCGA GCAATCTTAC GGTGAAGTCG ATGGCGACAG CGCCTCGCTA
GCCGAACTCA GTGCTCTGGT GAGTGCGTTA TCGCAATACC CGATTAATCA GCAACTGGCC
GTGACCGGCT CAGTCGACCA GTTTGGTCAT GTACAACCTA TCGGCGGCGT TAACGAAAAA
ATCGAAGGAT TTTTCGAGGT CTGTCAGCGC CGCGGCCTGA CGGGTAAGCA AGGGGTAGTT
ATCCCGGCGA CCAACCAGCG CCATTTATGC CTGTCGCCGG ATATCATCGA TGCGGTACGT
AAAGAACAAT TCCATATTTA TGCCGTGGAT TCAGTGGCTG AAGCCTTGAT GATATTAACC
CAAATGCCTT ATGACGATGA GCATCAGCCC AGCCTGCTCT CGGCGATCCG CGAACGCATT
GCACAGTTGG CACAACCGGA ACGACGTCGT TTCCCATGGT TTTTCCGTTG A
|
|---|
| Protein sequence | MTSNRLEWQQ LLPDHAPYQT LFSQAAQLAP AEFSAVQPRL ADALTIFCHP RSPSQFMLLK
AQENNAYLAL IANAIAHLPA RQPETLHGYR YHIDGRQISI QPAQYPDDNF AATLRSGYQE
WIEPEQLFGC VRVYKDDISL QPGLIHRVNG GTLILSARTL LAQPLMWLRL KQIIIDGQYH
WLSPDERQPL PVSIPPVPID LRLVVVGDRE SLGDIHDMEP ELGELAIYGE FESHLQLIEP
EDMVHWCSYI NALCLENQLP LLAADAWPEL FTLAVRYSGD QGSVPLCPQW LTHQLKHAAL
YTRQEDITGQ AIIDAVTTRR WREGYLSERM QDEIELGQVL IETEGEIIGQ VNGLSVLEYP
GYPLMFGEPT RISCVVHPGD GELTDVERKA ELGGNLHAKG MMIMQAFLIS ELELEQQLPF
SASIVFEQSY GEVDGDSASL AELSALVSAL SQYPINQQLA VTGSVDQFGH VQPIGGVNEK
IEGFFEVCQR RGLTGKQGVV IPATNQRHLC LSPDIIDAVR KEQFHIYAVD SVAEALMILT
QMPYDDEHQP SLLSAIRERI AQLAQPERRR FPWFFR
|
|---|
| |