Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1502 |
Symbol | |
ID | 8117377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1718568 |
End bp | 1720421 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644851893 |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_003003839 |
Protein GI | 251789118 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAACA GTACCGGATT GCAGTTTACC GTGAAGGTCG GCGCGTTGCC GGACACCACC TTCGCGGTGG TGGATTTTGA ACTCAGCGAG GCGCTGAACC AGCCGTTTGC GCTGTCGCTC AATCTGGCCA GCAGCCAGCC CGGCATCGAT TTCGGCGCGG TGCTGGACCA GCCGTGCGAG CTGCTGGTGT GGTACGAAGG CGAACTGCAG CGCCGGGTTA GCGGTATCGT CAGCCGCTTT GCCCAGGGCG ACACCGGTTT TCGCCGCACC CGCTATCAGG CCGAGGTACG CCCGGCGCTG TGGCGGCTTG GTCTGCGTAC CAACGCCCGC ATCTTCCAGA CCCAGAAGCC GGACACCATT ATCAGTACCC TGCTGGAAGA AGCCGGGATC ACCGATTACG CCTTCGCCCT GCGCCACGAG CACGCGGTGC GCGAGTACTG CGTGCAGTAC CGCGAAAGCG ACCTGGCGTT CATCCACCGG CTGGCGGCGG AAGAAGGGCT GTTCTACTTC CACGAATTTG AGGCCGGTAA GCACCGGGTG GTGTTCGCCG ATGACGCCGG TGCGCTGACC AAAGGCCCGG AGCTGTTCTT CAATCTCGCC ACGCAGGGGC TGAGCGAAGG GGCGTATGTG CGGCGTTTCC GCTACGCCGA AGCGGTCAGT ACCGCCGAAG TGGCGCTGAA GGACTACAGC TTCAAAACGC CAGCCTACGG GTTGCTGCAT AACAAGATGA GCAGCGAGCT GGACCATCAG CGCGAATCCT ACCAGCACTT TGATTACCCC GGCCGTTTCA AGCAGGACCC GAGCGGCAAG GCGTTTACCG GCTACCGGCT GGACGCGCTG CGCGCCGGCG CGATGACCGG CAGTGGCGAG TCCAACGCCG CCGAACTGAG GCCGGGCAGC AGCTTTACCC TGACTGAGCA CCCTAACCCG GCGTTTAATC TGGCCTGGCA GGTGGTGGCG GTGACCCACA GCGGCCAGCA GCCGCAGGCG CTGGAGGAAG AGAGCGGCGG CGAGCCGACC ACCCTCAGCA ACAGTTTCGA GGTGGTGAAA GCCACCACCA CCTGGCGGGC GGCCATGCCG TACAAGCCGA TGGTGGACGG CCCGCAGATT GCCACCGTGG TCGGCCCGGC GGGCGAAGAG ATTTACTGCG ACGAGTTTGG CCGGGTGAAG CTGCAGTTCC CGTGGGACCG CTACGGTGCC AGCGACGACC AGAGCTCCTG CTGGGTGCGG GTCAGTCAGG GCTGGGCCGG TGGCCAGTAC GGCCTGATTG CCATTCCGCG TATCGGTCAT GAGGTGGTGG TGAGCTTTCT GGAAGGCGAC CCGGACCAGC CCATCGTCAC CGGGCGCACC TTTCACGCCA CCAACCCCTC GCCGTATCCG TTGCCGGCCA ACAAAACCCG CACCTCGCTG CGCACCCGTA CCCATAAAGG GGCCGGGTTC AACGAACTGC GCTTTGAAGA CCAGGCCGGG CAGGAAGAGG TGTTTATCCA CGCCCAGAAG GACATGAACA CCGTGGTACT GAATAACCGC AGCACGGCGG TGAATGCCAG TCATACCGAG AATGTCGGCG GCGACCAGAC CGTGGTGGTG CAGCACAATC AGACGGTGTC GGTGAAGGAA AATCAGGTCA CCGAAATTCA GGGCGAGCAG ACCGTCGCCG TCACCAAAAA CCGTAACACC ACCGTTGACG ACAACGAGTC GCTGCAGGTG AAAAACAATA TCGCCATCCA GTCCCAGAGC GGCGACATCC TGATTGCCAC CGCGGGCGGC TTCATCGCCA TTGACAGCGA AGGCAACATT TCCATTACCG GCAAAGGACT GGTGCTGAAC GGCACCCGTA TCGATTTGAA CTGA
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Protein sequence | MANSTGLQFT VKVGALPDTT FAVVDFELSE ALNQPFALSL NLASSQPGID FGAVLDQPCE LLVWYEGELQ RRVSGIVSRF AQGDTGFRRT RYQAEVRPAL WRLGLRTNAR IFQTQKPDTI ISTLLEEAGI TDYAFALRHE HAVREYCVQY RESDLAFIHR LAAEEGLFYF HEFEAGKHRV VFADDAGALT KGPELFFNLA TQGLSEGAYV RRFRYAEAVS TAEVALKDYS FKTPAYGLLH NKMSSELDHQ RESYQHFDYP GRFKQDPSGK AFTGYRLDAL RAGAMTGSGE SNAAELRPGS SFTLTEHPNP AFNLAWQVVA VTHSGQQPQA LEEESGGEPT TLSNSFEVVK ATTTWRAAMP YKPMVDGPQI ATVVGPAGEE IYCDEFGRVK LQFPWDRYGA SDDQSSCWVR VSQGWAGGQY GLIAIPRIGH EVVVSFLEGD PDQPIVTGRT FHATNPSPYP LPANKTRTSL RTRTHKGAGF NELRFEDQAG QEEVFIHAQK DMNTVVLNNR STAVNASHTE NVGGDQTVVV QHNQTVSVKE NQVTEIQGEQ TVAVTKNRNT TVDDNESLQV KNNIAIQSQS GDILIATAGG FIAIDSEGNI SITGKGLVLN GTRIDLN
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