Gene Dd1591_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1481 
Symbol 
ID8117356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1701231 
End bp1702121 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content59% 
IMG OID644851872 
ProductP-type conjugative transfer protein VirB9 
Protein accessionYP_003003818 
Protein GI251789097 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.465895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGA ACACCGTACT GATAGGGCTG ATGCTGGCGT CGTGCGCCGT CTGGGGGGCC 
GCGATACCAC GCGGCAGCGC GTATGACAGC CGCATACAGC ATGTCACCTA TGACAGCCAG
AATGCCACCG TCGTCAACAC CCGCCCCGGC TACCTCACCA CGCTCCTGTT CGATGACGAT
GAAACGGTGC TCGACGCCCA GAGCGGCTTT CCCAAAGGCT GGCGAGTGAC CAAAAGCGAT
AACCGGGTGG ACGTCAGCCC TAACCCTGTC ATCCAGCCGG TAACGGAGGA CAACGGCAAT
AACGTCAACA AGGTGTTTCT GCCGACCGCC AAAGAGTGGA AAACCAACCT GTTGGTGGTG
ACATCCAAAC GCGAGTACAG CCTGGAGCTT AACGTGCTGG ATAACGACTC GCCCTCGCAG
GCCTTCATTA TCCGTTTTCA CTATCCCGAT GAAGCGCGCA GGCAATCAGC GGCCACCGAT
GCCGCCCACC GGCAACGCCT GCGTGAGGCA CAGGAAAAGC AACAGATTGC GGCCGCTTTC
GAGCAGGCCA CCACACCGCG AAACTGGCGC TATACCAAGC GGGTCGCGGC GGACTCGGCG
GCGATTGCAC CGGATTTTGC CTACGATGAT GGCCGCTTTA TCACTCTCGG TTTTTCAGCC
ACCAAAATTC TGCCGTCACT GTTTCGGGTC GTTAACCAAC AGGAACAAAC CGTCACGCCC
CTAATCACCA AACACGGGAA CTACACCGTG ATGGTCGTGC GGGCCATGTC GCCGCATCTG
GTGTTGCGTT ATGGCCGCGC CGTGGTCGGC ATTGAGAATA CCGCATTCGG CAACGTCGCC
GTCAGCGCTG GTGACACCGT TTCGCCCGCC GTCACGCTGG AGGCCAAATG A
 
Protein sequence
MLKNTVLIGL MLASCAVWGA AIPRGSAYDS RIQHVTYDSQ NATVVNTRPG YLTTLLFDDD 
ETVLDAQSGF PKGWRVTKSD NRVDVSPNPV IQPVTEDNGN NVNKVFLPTA KEWKTNLLVV
TSKREYSLEL NVLDNDSPSQ AFIIRFHYPD EARRQSAATD AAHRQRLREA QEKQQIAAAF
EQATTPRNWR YTKRVAADSA AIAPDFAYDD GRFITLGFSA TKILPSLFRV VNQQEQTVTP
LITKHGNYTV MVVRAMSPHL VLRYGRAVVG IENTAFGNVA VSAGDTVSPA VTLEAK