| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1462 |
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| Symbol | |
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| ID | 8120504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1673930 |
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| End bp | 1675372 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644851855 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003003801 |
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| Protein GI | 251789080 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0250838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTT ATTTTGTGCT TAAAACGCTG TCTGTCTCTC TCATGGCTGC CCTGCTGGCA
GGGTGTTCTC TGGCTCCGGC CTATGAACGT CCAGACGCGC CTGTTGCAAA AGACAGGCAA
CAATCAACCG GGGAAACACG GGTATCGGCT ACATCTCTGA ACTGGCATGA ACTGGTACAG
GATGGGCACT TGCGGGAACT GATTGCCCTC TCGTTAAAGG AAAATCGTAA TTTACGGCAG
ACCTTGCTGA ATGTGGAGGC AACACGTGCT CAGTATCAGA TTCAGAGATC CAGCCGGTTA
CCGGATCTGC AGCTTCAGGC ATCGGAAACA CGTCAACGGA CCCCGGCTGA CCTGAACACA
TCTGGGCAGT CTGGTATTGC AGGATCGTTC CAGGCTGGCG TAGGCATGAC AAGCTTTGAG
CTGGATTTGT TCGGGCGGGT GCATGACCTG TCGTCGTCTG CCTTTGAAGA ATATCTGGCA
ACGGAATACG GTAGCCGTAA TGCAGAAATC AGCCTGGTGT CAGAAATTAT CCAGGCATAC
CTGGTCAGAG ATGGGGCACT AAACAGGCAA CGTCTCTCTG AAGAAACGTT AGAAAACCGG
CAGCAAAGCC TGACATTAAT TAGCGCCAGG CTTAATGCCG GGACTGCTTC GGAACAGGAT
TATCAGGATG CACTGGGTCT TGCCGAACAG GCGAAGGCGG TTCTGGCCGG TGCCGAACGT
GAGGTCAGGC AGTCCACGAA TGCCCTGGTT CTCCTGTCGG GGGTACGGAA TATCGATCGT
TATCTGAGTA CTCAGGCAAC GGACAAACCC GTTATAGTGC AGAGTATCGC CCCTGGCGTA
CCGTCAGATC TGATAACCGG CAGGCCGGAT GTCATCGCGG CGGAGCATCG CCTGATGGCC
AGAAATGCGG ATATTGGCGC TGCCAGAGCG GCATTCTTTC CCCGGATTTC TCTGACCGGG
GTAGCGGGTA CCTCCAGTGC CGAGTTGTCA GGCCTGTTCG GTGCCGGGCA GGGCATGTGG
TCGTTCATGC CGCAGGTCAG TTTGCCGCTG TTCAGTGGGG GGCGTAACAG GGCAAATCTC
GAGCTGGCCA GTCTGCGAAA AGATGCCGCC ATTGCCGCCT ATGAACAGAC CATTCAGACT
GCATTCAGGG AAGTGGCCGA TGCGCTGGCA GCAAAAGATA CGCTGAACCG GGAAGAGGCC
GCACGCAAGG CTCTGGTGGC AAGTGATAAC AAGGCGCTGG CGATCGCCCG GGCGAGATAT
TCCGCCGGTG TTGATGACTA TCTTCGCTAT TTACAGTCAG AACGAAACAC GTTTGATAAT
GAGCTGGCGC TGATTAGCAC GATGACGCAA AGACAACAGG CTATCGTCAG TCTTTTCACT
GCACTGGGTG GTGGATGGAA AAAAGGTGAG CAGGCGGATA CGGCCTACGT GGCTAACCGA
TAA
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| Protein sequence | MKRYFVLKTL SVSLMAALLA GCSLAPAYER PDAPVAKDRQ QSTGETRVSA TSLNWHELVQ
DGHLRELIAL SLKENRNLRQ TLLNVEATRA QYQIQRSSRL PDLQLQASET RQRTPADLNT
SGQSGIAGSF QAGVGMTSFE LDLFGRVHDL SSSAFEEYLA TEYGSRNAEI SLVSEIIQAY
LVRDGALNRQ RLSEETLENR QQSLTLISAR LNAGTASEQD YQDALGLAEQ AKAVLAGAER
EVRQSTNALV LLSGVRNIDR YLSTQATDKP VIVQSIAPGV PSDLITGRPD VIAAEHRLMA
RNADIGAARA AFFPRISLTG VAGTSSAELS GLFGAGQGMW SFMPQVSLPL FSGGRNRANL
ELASLRKDAA IAAYEQTIQT AFREVADALA AKDTLNREEA ARKALVASDN KALAIARARY
SAGVDDYLRY LQSERNTFDN ELALISTMTQ RQQAIVSLFT ALGGGWKKGE QADTAYVANR
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