| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1441 |
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| Symbol | |
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| ID | 8120483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1642709 |
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| End bp | 1646869 |
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| Gene Length | 4161 bp |
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| Protein Length | 1386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644851836 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_003003782 |
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| Protein GI | 251789061 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit
[TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.281756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCGC ATCTGGTTGT CATCGGTAAC GGCCTGTCCA GCGCCCGGCT GGTAAAGAAA
CTGGGGCAGC TTGCAGCGCA ACGCTACCGC GTCACCCTCA TCGATCGCGA ACCGCGCGCC
GGTTATAACC GCGTGCTGCT CTCGTCGGTG CTGGGGGGCG AAAAAAAATT TGAGGAGACG
CAATTGGAGT CCGCGCCCGA GGCGATGGAC GTGACGGTAC TGACCGGCGA GTCGGTAGTG
CGTATCGACA GGGCGACGCG GGAGGTCATC ACCGATCGCC GCCGTCTGGC GTATGACCAC
CTGGTGCTGG CGACCGGTTC ACGTCCGTTT ATGCCGCCGT TGCCGGGCAT CAACCTGCCG
GGCGTGACTG GTTTTCGAAC TATGGATGAC GTCGAGCGGA TGTGGGCGGC GGTAAGGCAG
GGCGAGCCGG TGGTGGTGAT TGGCGGCGGA TTGCTGGGTA TTGAGGCTGC CGCCGCGTTG
CGCTTACAAG GCGCCACGGT GACGTTGCTG CACCGCCACC CCCGGCTGAT GGAGCGCCAG
CTTGACGATG TCGCCAGCGA CCTGCTGTGC GCCCGTCTGC GCGAACGCGG CATTCGTTGC
CTGACCGGTG TGCAGATCCA GTCGTTTATC GGTAATGAAA GGCGCGGGAA CAGCCAGGTC
GAGGCGGTGG CGCTGGCGGA CGGTACGCGT CTTCCCGCCG GTCTGGTGGT GGTGGCGACC
GGTGTACAGC CGGTATGTGA GCTGGCTCGC GACAGCGGCC TGCCGTGCGG GCGCGGCATT
CTGGTGGATG GCCAGTTACG TACCACCGAT GAAGACATCA GCGCGTTCGG CGAATGCGCG
GAGGTGAACG GGGAGACGGT AGGGCTGGTG GCGCCTTGTC TGGCGCAGGC GGATGTACTG
GCCGCCAGAC TGGCGGGCCG GCCGGTAGCG GATTACGCGC CGACGGCACT GGCTACCCGG
CTGAAAGTAA CGGGGATTGA CGTGGTGAGC GCAGGCGATC TGCACCCGCA GGCGGGTGAT
CGGCTCCACA CCTTGTCGGA CCCGCTCGGC GGTCATTACC GCCGCTTGAT ATTCCGCGAC
GATCGGTTAT GCGGTGCGCT GTTGTTCGGT CATGTCAGCG ACAGTCCGCA ACTGCTGGCG
GCCATGGAGG CCAGGCTGCC ATCGGCGCCG TCGTCGCTTT TGTTTGGTCT TTCTTTTCCT
GAAATAGACA TACGGCCTGA AGCCGTAAGG ATTTCTGTCA TGAGTAAACC CGTATTGGTG
GTAGTGGGGC ACGGCATGGT CGGTCACCAC TTTCTGGAGC AACTGGTGGA ACGCAACCTG
CACCAACAGT ATCACGTGGT GGTGTTTGGT GAGGAGCGCC ACCCGGCCTA TGACCGGGTA
CATTTGTCCG AGTATTTTGC CGGTCGCAGC GCCGGATCGC TGTCGATGGT CAATGAAGGT
TTTTTCGAGC AGACCGGTAT TGAGCTGCGA ACCGGCTGTC AGGTGATGGC AGTCGATCGT
CAGCGCCGCT GCGTGCGCGA CGCGAACGGT CAGGAAACGC CTTACGATCG CCTGGTGCTG
GCAACCGGCT CCTATGCGTT TGTACCGCCG ATCAAAGGCA ATGATCGCCC CGGCTGTCTG
GTCTATCGCA CGTTGGATAA CCTGGATGCG ATTGCCGACT ACGCGCGCGA ATCGCGCAGC
GGCGTGGTGG TCGGCGGTGG CCTGCTGGGG CTGGAAGCGG CCAATGCGCT GCGCCAACTG
GGGCTGGAAA CCCATGTGGT GGAGTTCGCG CCCCGGCTGA TGGCGGTGCA ACTGGATGAC
GGCGGTGCGC AACTGCTCAA ACGCAAGATT GAATCGCTGG GCCTGCATGT GCACACCAGC
AAAGAAACCA TCGCCATTAC GGCAGGCGAA CAGGCGCGTC ACCGCATGAA CTTTGCCGAT
GGCACGTCGC TGGAAACCGA TCTGATCCTG TTTTCCGCCG GTATTCGCCC ACGCGTTCGG
CTGGCGAGTG AGGCCGGGCT GGAGATAGGC CCGCGCGGCG GTATCGTGAT TGACGAGCAT
TGCCAGACCT CGGATGACGC TATCTTCGCC ATCGGCGAAT GTGCGGTATG GCAGGGGCAG
ATCTTCGGGT TGGTGGCGCC GGGCTACCAG ATGGCGCGCA CCGTCGCCGC TCAACTGGCG
CAGCAGGAGC AATCGTTTAC CGGCGCTGAC ATGAGTACCA AACTCAAGCT GTTAGGGGTG
GATGTGGCCT CGATCGGCGA TGCGCACGGC AATACCGAAG GCAGCCAGAG TTATCAGTGG
AACGACGAGC CGAATCAGGT TTACAAAAAA ATCATCGTTT CGGCGGACGG CAAACGGCTG
CTGGGGGCGG TGCTGGTGGG CGACAGCAGC GATTACAGCA CGTTGTTGCA GATGAAACTC
AACGACATGA CGTTACCCGC GCACCCGGAA AGCCTGATTC TGCCGGCGCT GGACGGCGCC
GCGCCGAAAG GGCTCGGTGT GGCGGCGCTG CCGGACAGCG CGCAGATCTG TTCCTGTCAC
AACGTCAGTA AAGCGGATAT TTTCGCGGCG GTAGACAACG GTTGTACCGA TCTGGCGTCG
CTGAAAGCCT GCACCAAGGC CGGCACCGGC TGCGGCGGCT GTGTGCCGCT GCTCAAGCAG
GTGATGGAGT ATCGGTTGCA GCAGTCGGGC ATCGAGGTAA AAAAAGATAT CTGCGAACAT
TTCGCCTATT CACGTCAGGA GCTGTACCAC CTGATCCGCG TCAACCGTAT CCACAGTTTC
GGCGAGTTGA TCGCCCGTCA TGGTCACGGG CTTGGGTGTG AAATTTGTAA GCCGCTGGTC
GGCTCGATGC TGGCGTCCTG CTGGAACGAC TATGTACTGA AACCTGAACA CGTGCCGTTG
CAGGATACCA ATGACCGTTT TCTGGCCAAC ATCCAGAAAG ACGGCACGTA CTCGGTAGTG
CCGCGCATTC CCGGTGGTGA AATAACCCCG AAAGGCTTGA TTGCGATTGG CCAGGTGGCG
GAACGCTATC ACCTGTACAC CAAAATTACC GGCGGCCAGC GGGTCGATTT GTTCGGTGCG
CGGTTGGAAC AACTGCCGGC TATCTGGCAG GAGTTGATCG ACGCCGGCTT TGAAACCGGT
CATGCCTACG GCAAATCGCT GCGTACCGTG AAATCCTGCG TCGGTTCCAC CTGGTGCCGT
TATGGCGTGC AGGATTCCAC CGGGCTGGCG ATTGCGCTGG AGCACCGTTA CAAAGGGTTG
CGCTCGCCGC ACAAGCTCAA AATGGCGGTA TCCGGCTGTA CCCGCGAGTG CGCCGAAGCG
CAGGGTAAAG ACATCGGCGT GATCGCCACC GACAAGGGAT GGAACCTGTA TGTGTGCGGC
AATGGCGGTA TGAAACCGCG TCATGCCGAC CTGTTCGCCA GCGATCTGGA CACCGACACC
TTGCTGCGGC TGATCGACCG CCTGCTGATG TTTTACATCC GTACCGCGGA CCGGCTCCAG
CGCACCAGCG TCTGGCTAGA TAACCTGGAA GGCGGGGTTG ATTACCTGCG TCAGGTGGTG
ATCGACGACA GTCTGGGGAT TGCCGACGAG TTGGAAAAAG AGATGCGCCA TGTTATCGAC
AGCTATCAGT GCGAGTGGCA GACCACGCTG GCGCATGACG AAAACCGGGC CTTGTTCCGC
GCGTTCCTTA ACAGCGATAC CCCGGATGAA GCGGTGGTGA TGGTGCCGGA ACGCAGTCAG
CCTCGCCCGG CGCGCCCGGA AGAGAAAAAG CCGACTACCG TATCCGAGGC GGTCGGCACC
GATGGCTGGC AGTGCGTCGG TTTCCTCAGC GATATCCCGG CGAATGCAGG GATGGCGGCG
CGCGTCGGTC ATCAACAGGT GGCGTTGTTC CATCTCCCGG CGGCGCAACC GGGGCAGGCG
GCGCGCGTAT TCGCGCTCGA CAATCTGGAG CCGGGCAGTG GTGCCAACGT GCTGTCGCGC
GGCATTGTCG GTGACGTGGC GGGCGAGCCG GTGGTGATTT CGCCGTTGTA CAAAAAGCGT
CTGCGCCTGC GTGACGGCGT CAGCCCGGAT GACAGCCAAC TGCGCGTACG TGCCTGGCCG
GTGCGCATCG TGCAGGAGCG GATCTGGGTG GCCGCTGAGC CGATAAGCGT GGTCGCGGCC
GACATGGCGG AGGCGTTATG A
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| Protein sequence | MRAHLVVIGN GLSSARLVKK LGQLAAQRYR VTLIDREPRA GYNRVLLSSV LGGEKKFEET
QLESAPEAMD VTVLTGESVV RIDRATREVI TDRRRLAYDH LVLATGSRPF MPPLPGINLP
GVTGFRTMDD VERMWAAVRQ GEPVVVIGGG LLGIEAAAAL RLQGATVTLL HRHPRLMERQ
LDDVASDLLC ARLRERGIRC LTGVQIQSFI GNERRGNSQV EAVALADGTR LPAGLVVVAT
GVQPVCELAR DSGLPCGRGI LVDGQLRTTD EDISAFGECA EVNGETVGLV APCLAQADVL
AARLAGRPVA DYAPTALATR LKVTGIDVVS AGDLHPQAGD RLHTLSDPLG GHYRRLIFRD
DRLCGALLFG HVSDSPQLLA AMEARLPSAP SSLLFGLSFP EIDIRPEAVR ISVMSKPVLV
VVGHGMVGHH FLEQLVERNL HQQYHVVVFG EERHPAYDRV HLSEYFAGRS AGSLSMVNEG
FFEQTGIELR TGCQVMAVDR QRRCVRDANG QETPYDRLVL ATGSYAFVPP IKGNDRPGCL
VYRTLDNLDA IADYARESRS GVVVGGGLLG LEAANALRQL GLETHVVEFA PRLMAVQLDD
GGAQLLKRKI ESLGLHVHTS KETIAITAGE QARHRMNFAD GTSLETDLIL FSAGIRPRVR
LASEAGLEIG PRGGIVIDEH CQTSDDAIFA IGECAVWQGQ IFGLVAPGYQ MARTVAAQLA
QQEQSFTGAD MSTKLKLLGV DVASIGDAHG NTEGSQSYQW NDEPNQVYKK IIVSADGKRL
LGAVLVGDSS DYSTLLQMKL NDMTLPAHPE SLILPALDGA APKGLGVAAL PDSAQICSCH
NVSKADIFAA VDNGCTDLAS LKACTKAGTG CGGCVPLLKQ VMEYRLQQSG IEVKKDICEH
FAYSRQELYH LIRVNRIHSF GELIARHGHG LGCEICKPLV GSMLASCWND YVLKPEHVPL
QDTNDRFLAN IQKDGTYSVV PRIPGGEITP KGLIAIGQVA ERYHLYTKIT GGQRVDLFGA
RLEQLPAIWQ ELIDAGFETG HAYGKSLRTV KSCVGSTWCR YGVQDSTGLA IALEHRYKGL
RSPHKLKMAV SGCTRECAEA QGKDIGVIAT DKGWNLYVCG NGGMKPRHAD LFASDLDTDT
LLRLIDRLLM FYIRTADRLQ RTSVWLDNLE GGVDYLRQVV IDDSLGIADE LEKEMRHVID
SYQCEWQTTL AHDENRALFR AFLNSDTPDE AVVMVPERSQ PRPARPEEKK PTTVSEAVGT
DGWQCVGFLS DIPANAGMAA RVGHQQVALF HLPAAQPGQA ARVFALDNLE PGSGANVLSR
GIVGDVAGEP VVISPLYKKR LRLRDGVSPD DSQLRVRAWP VRIVQERIWV AAEPISVVAA
DMAEAL
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