| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1440 |
|---|
| Symbol | |
|---|
| ID | 8120482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1641902 |
|---|
| End bp | 1642696 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644851835 |
|---|
| Product | nitrate ABC transporter, ATPase subunits C and D |
|---|
| Protein accession | YP_003003781 |
|---|
| Protein GI | 251789060 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0618101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAATC AACCGATTAT CCGTATTCAG CAGGTGAGCC AGCGTTTCTC CACCGCCAGC
GGTTCGTTCG TGGCGCTTGA TAACGTGAGT TTCGATATTC ATGCCGGCGA AACCCTGAGC
CTGATTGGGC ACTCCGGCTG CGGCAAATCG ACGCTGCTCA ACCTGATTGC CGGGTTAACG
CTGCCGACCC GCGGCGGCCT GCTGTGCGAC AACCGTGAAA TCGACGGTCC GGGGCCGGAG
CGGGCGGTGG TGTTCCAGAA CCATTCGCTG CTGCCGTGGC TCACCACTTA CGACAACGTG
GCGCTGGCGG TGAAGCAGGT GTTCCGCGGC CAGATGGGCA AGGCCGAAAT GCACGAATGG
ATTGTGCATA ACCTCGACCT GGTGCACATG GGACATGCGC TGAACAAGCG CCCGCACGAA
ATTTCCGGTG GCATGAAGCA GCGGGTGGGC ATCGCCCGCG CGTTGGCGAT GAAACCCAAG
GTGCTGCTGA TGGATGAGCC GTTCGGCGCG CTGGATGCGC TGACCCGCGC CCATTTGCAG
GATGCCGTCA TGGATATTCA GCAGCGACTG AATACCACCA TCGTGCTGAT TACCCACGAC
GTGGATGAAG CGGTGCTGCT GTCCGACCGG GTGCTGATGA TGACCAACGG CCCGGCCGCT
ACGGTGGGAG AAATCATGAC GGTGGCGCTG GAGCGACCGC GTTCCCGCGT AGCGCTGGCG
GACGACCCGC GTTATCACCA GTACCGCCAG CAGGTGCTGC ATTTCCTCTA CGAGAAACAG
CCGCACGCGG CTTGA
|
|---|
| Protein sequence | MRNQPIIRIQ QVSQRFSTAS GSFVALDNVS FDIHAGETLS LIGHSGCGKS TLLNLIAGLT
LPTRGGLLCD NREIDGPGPE RAVVFQNHSL LPWLTTYDNV ALAVKQVFRG QMGKAEMHEW
IVHNLDLVHM GHALNKRPHE ISGGMKQRVG IARALAMKPK VLLMDEPFGA LDALTRAHLQ
DAVMDIQQRL NTTIVLITHD VDEAVLLSDR VLMMTNGPAA TVGEIMTVAL ERPRSRVALA
DDPRYHQYRQ QVLHFLYEKQ PHAA
|
|---|
| |