| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1387 |
|---|
| Symbol | |
|---|
| ID | 8118462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1575984 |
|---|
| End bp | 1576478 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644851782 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003003728 |
|---|
| Protein GI | 251789007 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3013] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00279413 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA CCAATGCTCA AAGACTTATC CTATCTAATC AATACAAAAT GATGTCGATG
CTGGATCCCG ATAATGCTGA GCGTTATCGC CGTCTGCAAA CCATCATTGA ACGAGGTTAC
GGGCTGCAAA TGCGCGAGCT GGATCGCGAT TTCGGCGATT TAAGTGAAGA TGTGTGTCGT
ACCCTCATCA ATGTGATGGA AATGCACCAT GCGTTGCAGG TTTCCTGGGC GAATCTGAAA
GATAAGCCGG ATATTGACGA ACGCCGCCTG GCGTTTCTGG GTTTCGATGC GGCGACTGAA
GCGCGCTATC TTGGCTATGT GCGCTTTATG GTGCATGTGG AAGGGCGTTA TCCTCACTTT
GACTCCGGCA CGCACGGCTT TAACTCACAG ACCAAAATGT GGGATAAATA CGTCCGTATG
CTGGCGATTT GGCAATCTTG TCCGCGCCAG TATCATCTGA GTGCGGTGGA GATTGCACAA
ATCATCAATG CCTGA
|
|---|
| Protein sequence | MEMTNAQRLI LSNQYKMMSM LDPDNAERYR RLQTIIERGY GLQMRELDRD FGDLSEDVCR
TLINVMEMHH ALQVSWANLK DKPDIDERRL AFLGFDAATE ARYLGYVRFM VHVEGRYPHF
DSGTHGFNSQ TKMWDKYVRM LAIWQSCPRQ YHLSAVEIAQ IINA
|
|---|
| |