Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1378 |
Symbol | |
ID | 8118453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1566526 |
End bp | 1567242 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644851773 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003003719 |
Protein GI | 251788998 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGA TTCTGCAACA ATACTGGCAA GCCTTGCTGT GGAGTGACGG CTACCGTCTT ACCGGGCTGG CGATGACGCT GTGGCTGCTG ATTGTATCGG TGACCCTCGG CGGATTGATG GCGATTCCGC TGGCGATAGC CCGCGTCTCG CCTCGTCGCC GCTACCGGTT GCCGGTCTGG GCTTTTACCT ATGTGTTCCG CGGCACGCCG CTCTACGTAC AACTGCTGGT GTTTTACTCT GGCGTATACA GCCTGGAAAT CGTGCGCGGC ACCGACTTGT TGAACGCGTT TTTTCGCAGC GGCCTGAATT GCGCCGTTCT GGCGCTGGCG CTAAATACTT GCGCCTATAC CACGGAAATT TTCGCCGGTG CCATTCGTTC TGTGCCGCAC GGTGAAATCG AAGCGGCGCG GGCCTACGGT TTTTCACGTT TCAAACAATA TCGCTGCATC ATTTTGCCGG GGGCATTGCG CATCGCGTTA CCGGCCTACA GCAACGAAGT CATCCTGATG CTGCATTCCA CCTCGCTGGC ATTTACCGTC ACGGTGCCGG ACTTGCTGAA AGTGGCGCGT GATATCAACG CCGCTACCTA TAAACCGTTT TATGCCTTTG GCATCGCCGG CGTGATGTAC CTGGCGATAT CATTTGTATT GATCTCGTTG TTCAGGAAGG CGGAACGCCG CTGGTTACGG CATCTTCACA CCCGTTCATC CCATTAA
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Protein sequence | MSEILQQYWQ ALLWSDGYRL TGLAMTLWLL IVSVTLGGLM AIPLAIARVS PRRRYRLPVW AFTYVFRGTP LYVQLLVFYS GVYSLEIVRG TDLLNAFFRS GLNCAVLALA LNTCAYTTEI FAGAIRSVPH GEIEAARAYG FSRFKQYRCI ILPGALRIAL PAYSNEVILM LHSTSLAFTV TVPDLLKVAR DINAATYKPF YAFGIAGVMY LAISFVLISL FRKAERRWLR HLHTRSSH
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