| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1358 |
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| Symbol | mnmC |
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| ID | 8118433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1543776 |
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| End bp | 1545794 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644851753 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_003003699 |
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| Protein GI | 251788978 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0608182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAGCC CCTTCATCCA ACATGCAGAC CTGAATTGGA ACGATCAGGG TACACCTGTA
TCGCAACAGT TTGATGACGT CTATTTTTCC AACCAGGACG GGCTGGCGGA AACCCGCTAT
GTCTTTCTGC AGGGCAACGG TTTTCCGCAA CGCTTCCTTG AACATACCGG CCCGGTGCTG
ACCATCGCGG AAACCGGTTT TGGTACCGGG CTGAATTTTT TGACGTTATG GCAGGCGTTC
GACGGGTTTC GCCGGCAACA CCCGGATGCC GCCTTGCAAC GCCTGCACTT CATCAGTTTT
GAAAAATTTC CGCTGCGTCA GCCGGATCTG GCCGCCGCAC ATGCCGCCTG GCCGGAGCTG
GCTCCCTTCG CCGATGAACT GCAACGACAA TGGCCGCTGG CGCTGCCCGG TTGTCATCGG
CTGATTCTTG CACAAGGACG CATCACGCTA GATCTGTGGT TCGGTGATGT CAATACGCTG
CTGCCGAGGT TGGACAACAG CCTGACGCGC CATATCGATG CCTGGTTTTT GGATGGATTT
GCGCCGGCTA AAAATCCGGA CATGTGGACT GAAACCTTGT TTAACGCTAT GGCGCATCTG
TGCCGCCACG GGGGAACGTT CGCCACGTTC ACCGCCGCCG GTTTTGTGCG TCGCGGCCTG
CAACAGGCAG GGTTTCAGGT CAGCAAAATC AAAGGATTCG GGCAGAAGCG GGAAATGCTC
TGCGGCACCG TCTTGCACCG CAGCGAATCG CCTCATCCAT TCCCCTGGTA CGCTCGCCCC
GCCGCTGCGC ATCCGCAAGA GGTGGCGATT ATCGGCGGCG GTATCGCCGC CGTCCTGACG
GCACTCGCGC TGCAACGCCG CGGTGCGCAG GTTACGCTGT ATTGCGCCGA CGCACAGGTA
GGGCAACGCG CTTCCGGCAA TCGCCAGGGG GCGCTCTATC CACTGCTGAA TGACAAGCAG
GATGCCTTGT CAGGGTTCTT CGCCGCTGCA TTCGGCTTCG CACGCCGCTG CTACGACGGC
CTCGCCGCAC AAGGCGTGGC GTTTGAGCAC GACTGGTGCG GCGTCAGCCA ACTGGCTTAC
GATGAAAAAA GCACACGTAA ACTTGCACAG ATTTTGGCGG GCAACTGGCC GGATACGCTG
GTGCACCCGG CAGATGCCGA CACGCTGACC GAACAGGCCG GCCTGCCGTT GCACACCCAC
GGCCTCACCT ACCCGCAGGG TGGTTGGCTA TGCCCGGCCG AACTGACCGA ATCAGCCTTC
ATGCTGGCAG GCAGGCAAGG ACTCCAGGCG CACCTTGCCA CTCGCGTGAC GGCACTCGCG
CCGACCTGCA ACGGCTGGCA ACTGACGCTG GCTGATGGCC GTCAGGTACG ACACGCAACG
GTGGTGCTGG CGAACGGTCA CCAGATAAAC GACTGGGAGC AGACCCGTCA CCTGCCCGTT
TACGCGGTAC GTGGTCAGGT CAGTCACATC CCCGACACGC CGTCGTTATC GGCGCTGCGT
CAGGTGCTGT GTTACGACGG TTACCTGACG CCGGTCAGCC CACGTCATCA GACACACTGC
ATCGGCGCCA GTTATCACCG TGGCGACACC ACCACCGATT ACCGTGAAGC CGAACAACGG
CATAACCGTC AGCGGCTCAT TGATTGCCTG CCCGACAGCG ACTGGCCGGC TTCGATAGAC
ATTTCCGGAC AACAGGCGCG ATGCGGCGTG CGTTGCGCCA TTCGCGATCA TCTGCCGTTG
ATCGGTCAGG TGCCCGATTA CCAGCAAACG CTCGCCGGGT ATCAACATCT GCCCGAACAG
CTTGCCGCCG GCGCAGAGAT AGCCACGGCC CCCGCCTGGC CGAATCTTTA TCTGCTCGGC
GCATTGGGCT CGCGCGGCTT ATGCTCGGCA CCGCTGGCCG CCGAAATCCT GGCATCCCAG
TTATTCGGCG AACCGCTACC GCTGGATAGC GATACACTGG CGGCGTTGCA CCCTCATCGT
TTCTGGGTAA GAAAGCTGCT GAAAGGCAAA GCGGTATAA
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| Protein sequence | MTSPFIQHAD LNWNDQGTPV SQQFDDVYFS NQDGLAETRY VFLQGNGFPQ RFLEHTGPVL
TIAETGFGTG LNFLTLWQAF DGFRRQHPDA ALQRLHFISF EKFPLRQPDL AAAHAAWPEL
APFADELQRQ WPLALPGCHR LILAQGRITL DLWFGDVNTL LPRLDNSLTR HIDAWFLDGF
APAKNPDMWT ETLFNAMAHL CRHGGTFATF TAAGFVRRGL QQAGFQVSKI KGFGQKREML
CGTVLHRSES PHPFPWYARP AAAHPQEVAI IGGGIAAVLT ALALQRRGAQ VTLYCADAQV
GQRASGNRQG ALYPLLNDKQ DALSGFFAAA FGFARRCYDG LAAQGVAFEH DWCGVSQLAY
DEKSTRKLAQ ILAGNWPDTL VHPADADTLT EQAGLPLHTH GLTYPQGGWL CPAELTESAF
MLAGRQGLQA HLATRVTALA PTCNGWQLTL ADGRQVRHAT VVLANGHQIN DWEQTRHLPV
YAVRGQVSHI PDTPSLSALR QVLCYDGYLT PVSPRHQTHC IGASYHRGDT TTDYREAEQR
HNRQRLIDCL PDSDWPASID ISGQQARCGV RCAIRDHLPL IGQVPDYQQT LAGYQHLPEQ
LAAGAEIATA PAWPNLYLLG ALGSRGLCSA PLAAEILASQ LFGEPLPLDS DTLAALHPHR
FWVRKLLKGK AV
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