| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1340 |
|---|
| Symbol | fadI |
|---|
| ID | 8118415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1526474 |
|---|
| End bp | 1527793 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644851735 |
|---|
| Product | 3-ketoacyl-CoA thiolase |
|---|
| Protein accession | YP_003003681 |
|---|
| Protein GI | 251788960 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATGC GCGAAGTCAC GCCGTTGCTT ACCCGCCGCG GTGATCGCAT TGCGATTGTC
AGTGGATTGA GAACGCCGTT TGCCCGGCAA GCGACGGTCT ATCATGGCAT TCCGGCGCTG
GAGCTGGGAA TACGGGTGGT CAACGAACTG TTGCTGCGCA GCGGTATTGA GCCTGAGCAG
GTTGAGCAAC TGGTGTTCGG GCAGGTGATT CAGATGCCTG AAGCGCCGAA TATTGCGCGT
GAAATCGTAC TGGGTAGCGG CCTGAGCGCG TATACCGACG CTTATAGCAT TTCCCGTGCC
TGCGCCACCA GCTTTCAGGC GGTTGCTAAC GTAGCGGAAA GTATTTTGGC CGGCACGATC
GACATCGGCA TTGCCGGCGG GGCGGATTCC GCTTCCGTGC TGCCGATTGG CGTCAGTAAA
GCGTTGGCGC GCACGCTGGT TGATCTGTCG CGCGCCAGAA CGTTGCCGCA ACGGCTGGCG
TTGCTGGCCC GTTTGCGACC GCGGGATTTA CTGCCGGTTG CGCCTGCCGT CGCGGAGTAT
TCCACCGGCT TGCGCATGGG GGACACCGCC GAGCAGATGG CGAAAGATTA CCGCATCAGC
CGTGATGCGC AGGATGCTTT CGCTCATCGT TCCCACCAGC GGGCTACGCA AGCCTGGGCT
GAGGGCGTAT TGCGTGATGA AGTGATGACG ACCTGGGTGC CGCCGTATCA GCAGGCGGTG
AGTGAAGACA ACACGGTTCG CCGTGACAGT GCGCCGCCGC AGTATTCCCG CCTTAAACCC
GCGTTTGATC GCCGTTACGG TAGCGTGACC GCAGGTAATA GTTCACCGCT AACCGATGGC
GCGGCCGCAG TGTTGTTAAT GAACGAATCC CGCGCCAGTG AATTGCGATT AACGCCGCTC
GGCTACCTGC GTAGTTATGC GTTTAGCGCC ATTCCGGTAC AGCGGGATAT GCTGGCGGGG
CCGGCGTATG CCACGCCGCT GGCGCTTGAT CGGGCCGGTA TTCGGCTGGA CGAGCTGGCG
TTGATCGATA TGCATGAGGC CTTTGCCGCT CAAACGCTGG CTAATCTTCA CCTGTTTGCC
AGCGCCGAAT TCGCTCGCGA CAAACTCGGG CGTAGCGCGC CGTTAGGCGA GGTCGATGAG
GCGAAATTTA ACGTACGGGG CGGGTCGATT GCATATGGGC ATCCTTTTGC CGCGACGGGA
GCGCGCATGA TGACCCAAAC ACTGCATGAG TTGCGCCGAC GCGGTGGCGG ATTAGGACTG
GTGACCGCCT GCGCGGCGGG AGGATTGGGT GCGGCGATGG TACTGGAGGT GACGAAATGA
|
|---|
| Protein sequence | MVMREVTPLL TRRGDRIAIV SGLRTPFARQ ATVYHGIPAL ELGIRVVNEL LLRSGIEPEQ
VEQLVFGQVI QMPEAPNIAR EIVLGSGLSA YTDAYSISRA CATSFQAVAN VAESILAGTI
DIGIAGGADS ASVLPIGVSK ALARTLVDLS RARTLPQRLA LLARLRPRDL LPVAPAVAEY
STGLRMGDTA EQMAKDYRIS RDAQDAFAHR SHQRATQAWA EGVLRDEVMT TWVPPYQQAV
SEDNTVRRDS APPQYSRLKP AFDRRYGSVT AGNSSPLTDG AAAVLLMNES RASELRLTPL
GYLRSYAFSA IPVQRDMLAG PAYATPLALD RAGIRLDELA LIDMHEAFAA QTLANLHLFA
SAEFARDKLG RSAPLGEVDE AKFNVRGGSI AYGHPFAATG ARMMTQTLHE LRRRGGGLGL
VTACAAGGLG AAMVLEVTK
|
|---|
| |