Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1299 |
Symbol | |
ID | 8118693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1474160 |
End bp | 1476310 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644851694 |
Product | general secretion pathway protein D |
Protein accession | YP_003003641 |
Protein GI | 251788920 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTGGCA AAGGGATAAA AAAAAGCTGG GGGTGGCTGG GCTTAACCGT TCTCCTGCTT GGCTCGCCAT GTGGCTGGGC CGCTGAATTT TCAGCCAGTT TCAAAGGAAC CGATATTCAG GAGTTCATCA ACACCGTCAG TAAGAATTTG AACAAAACGG TGATTATCGA CCCAACGGTG CGCGGTACTA TCAGTGTGCG CAGTTACGAT ATGATGGACG AAGGACAATA CTACCAATTC TTCCTCAGTG TCCTTGATGT GTATGGTTTT TCGGTGGTGC CGATGGATAA CGGCGTCCTG AAAGTCATCC GTTCCAAAGA TGCTAAATCG TCGTCGATTC CTCTGGCTAA TAATGAACAA CCGGGCGTCG GCGATGAACT GGTGACCCGT GTCGTACCGC TCAACAACGT GGCGGCGAGG GATTTGGCTC CGTTGCTGCG TCAGCTTAAC GATAACGCGG GTGCCGGTAC GGTAGTGCAT TATGAACCGT CCAACGTCCT GCTGATGACG GGGCGCGCGG CGGTGATCAA GCGGTTGGTC GATATCGTCA ATACCGTGGA CAAAACCGGT GATCGTGAAA TGATCACCGT GTCATTGACT TACGCATCGG CGGAAGATGT CGCCAAGCTG GTGAACGATC TCAATAAGAC CGACGAGAAA AACGCATTGC CAAGCACCAT GCTGGCCAAT GTGGTGGCAG ATGAACGTAC CAACTCGGTG GTGGTCAGCG GCGAAGAAAA CGCCCGCCAG CGCGCGGTGG AGATGATCCG CCAACTGGAT CGCAAGCAGG TGGCGCAGGG TGGGACTAAG GTTATCTATC TTAAGTATGC CAAGGCGTTG GATCTGATCG AAGTACTGGC CGGTAATGGG ACCAGCGGTA ATCGTAATTC ATCGTCGACA AACTCATCGC GCCCTTCCTC AACGCGTTCG AACAACACGT TAAACAACAG TAACTCCAGT TCATCCGGCA GTAGTTCCGG CAGTGGTTCA TCGTCATCCT CCTCCAGTTC CAGTATGGGA TTTGGTTCCG CGTTTGGCTC GGCCAACAGT TCGGGCGGGC GGACGATTGT GATCCAGGGC AAAGAGGTGA CGGTACGCGC TCATGATCAG ACCAACTCGC TGATCATTAC CGCGCCGCCC GATATCATGC GTGATCTGGA ACAGGTGATT AATCAACTGG ATATTCGCCG TCCGCAGGTG CTGGTGGAAG CGATCATCGC CGAAATTCAG GATGCCGATG GTTTGAATCT GGGGATCCAG TGGGCCAACA AGCGTGCCGG CATGATCCAG TTCCCTAACT CCAACGCCAG CAATAACATA CCGATCTCTA CCGCGATGAT CGGAACCGAT CAGTTCCGCA GCGACGGTAC GCTGACGACG GCGTATGCAA ACGCACTGGG TAGCTTCAAT GGTATTACCG CCGGTTTTTA TCGTGGCAAC TGGTCCATGC TGCTGACGGC ATTGTCCAGC GACGGCAAAA ACGATGTACT GGCGACGCCG AGTATTGTGA CGCTGGATAA CATGGAAGCG ACCTTCAATG TGGGGCAGGA AGTGCCGGTG TTGACGGGGC AGCAAACGAC AATGGGGTCT GGTAGCAATA TTTTTAACAC CGTAGAGCGT AAGACCGTCG GCATCAAACT GCGGGTCAAA CCGCAGATCA ACGAAGGCGA TTCGGTGTTG CTGCAAATTG AGCAGGAAGT CTCCAGTGTG GCGGAAGGCA ATAGCAGCAC CAACAGTTCG CTGGGAGTGA CCTTTAATAC TCGTACCGTA AATAACGCTG TGATGGTTAC CAATGGCGAA ACCGTAGTGG TGGGCGGCCT GCTGGATAAA AGTACCATTG AAACCAATAA CAAAGTTCCG TTGCTGGGTG ATATTCCGTG GCTGGGCAGC CTGTTTCGTT CTAAAAGCCA GTCGATGAGC AAGCGCAACC TGATGCTGTT CCTGCGTCCG ACCATTATTC GCGACCCCCA GCAGTATCAG CAGGCGTCGA TCAGTAAATA CAATTCTTTC AACAACGAGC AGCAACAGCA GCGTGGTCAG GGTAACTCGG TGCTGGACAA CAACACTCTG CGTTTATCCG GTGGCAATAC CTACACCTTC CGGCAGGTGC AATCGTCCAT CTCCGCGTTT TATCAGCCGG AGGGGCGATG A
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Protein sequence | MLGKGIKKSW GWLGLTVLLL GSPCGWAAEF SASFKGTDIQ EFINTVSKNL NKTVIIDPTV RGTISVRSYD MMDEGQYYQF FLSVLDVYGF SVVPMDNGVL KVIRSKDAKS SSIPLANNEQ PGVGDELVTR VVPLNNVAAR DLAPLLRQLN DNAGAGTVVH YEPSNVLLMT GRAAVIKRLV DIVNTVDKTG DREMITVSLT YASAEDVAKL VNDLNKTDEK NALPSTMLAN VVADERTNSV VVSGEENARQ RAVEMIRQLD RKQVAQGGTK VIYLKYAKAL DLIEVLAGNG TSGNRNSSST NSSRPSSTRS NNTLNNSNSS SSGSSSGSGS SSSSSSSSMG FGSAFGSANS SGGRTIVIQG KEVTVRAHDQ TNSLIITAPP DIMRDLEQVI NQLDIRRPQV LVEAIIAEIQ DADGLNLGIQ WANKRAGMIQ FPNSNASNNI PISTAMIGTD QFRSDGTLTT AYANALGSFN GITAGFYRGN WSMLLTALSS DGKNDVLATP SIVTLDNMEA TFNVGQEVPV LTGQQTTMGS GSNIFNTVER KTVGIKLRVK PQINEGDSVL LQIEQEVSSV AEGNSSTNSS LGVTFNTRTV NNAVMVTNGE TVVVGGLLDK STIETNNKVP LLGDIPWLGS LFRSKSQSMS KRNLMLFLRP TIIRDPQQYQ QASISKYNSF NNEQQQQRGQ GNSVLDNNTL RLSGGNTYTF RQVQSSISAF YQPEGR
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