| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1117 |
|---|
| Symbol | |
|---|
| ID | 8118269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1287904 |
|---|
| End bp | 1288887 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644851519 |
|---|
| Product | cytoskeletal protein RodZ |
|---|
| Protein accession | YP_003003468 |
|---|
| Protein GI | 251788747 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTG AAGCCACTCA AGATAATACT GCAGCAACAA TAATGACCCC GGGCGAACGT
TTGCGTGAAG CGCGCGAGCA GTTGGGACTC ACCCAACAGG TTGTTGCCGA ACGGTTGTGC
CTGAAAGTAT CGACCGTTCG TGAAATAGAA GATAACAATA CGCCTGCTGG CCTTGCCCCC
ACTTTTCTTC GTGGTTATAT CCGCTCCTAT GCCCGACTGG TTCACCTTCC TGAAGATGAA
TTGCTGCCGA TGCTGGAAAA GCAGGTCATG CCGAGCCGCG TTTCCAATGT CGCGCCGATG
CAGAGCCTGG CATTAGGTAA AAGCCGTAAG AAGCGCGATG GTTGGTTGAT GTTGTTTACC
TGGTTGATTT TGCTCGGCGT GCTGGGCCTG ACGGTGGCCT GGTGGTGGCA GAATCACCAG
GCACAGCAGC AAGAAATTAA TTCGATGGTG GATCACGCCA ACGCGTCTCA GAACCGTAAA
GACGGGCAGG CCGGCGATGC AAATAGTGAT CCGGAGCCGG TAGATACCGA CGACAGTGTC
GCAACCGGTG GGCAATCTAT CGTATTGAAC TCGAACTCGC CTGCGGCGGT GCCGTCACAG
TCGGCCGTTA CCCCACAAGC GGACAGCGGC GCAGCGTCTT CGTCTCAGGC ACTCGCGCAG
GCTTCTGGAC AGCCGCTGCT CAACCAGGCG GCGATTGCAC CGGCCAGCGC TGTGCCGGCA
ACGGATGCGT CAGGTGCGCC GGGGGCTATC GTGATGCGCT TTACCGCGGA TTGCTGGCTG
GAAGTGGTTG ATGCGGCGGG CAAGAAGCTG TTTAGCGGCG TACAGCGTAG CGGCAATGTG
TTGAATTTGA CCGGCCAGGC GCCGTACCGG TTAAAAATCG GTGCGCCGGG CGCGGTACAG
GTCGAGTTTC AGGGTAAACC GGTAGATTTG AGCCGGTTTG TCAAAAGCCA TCAGGTGGCT
CGTATTACGC TGACGGCAGA GTAA
|
|---|
| Protein sequence | MNTEATQDNT AATIMTPGER LREAREQLGL TQQVVAERLC LKVSTVREIE DNNTPAGLAP
TFLRGYIRSY ARLVHLPEDE LLPMLEKQVM PSRVSNVAPM QSLALGKSRK KRDGWLMLFT
WLILLGVLGL TVAWWWQNHQ AQQQEINSMV DHANASQNRK DGQAGDANSD PEPVDTDDSV
ATGGQSIVLN SNSPAAVPSQ SAVTPQADSG AASSSQALAQ ASGQPLLNQA AIAPASAVPA
TDASGAPGAI VMRFTADCWL EVVDAAGKKL FSGVQRSGNV LNLTGQAPYR LKIGAPGAVQ
VEFQGKPVDL SRFVKSHQVA RITLTAE
|
|---|
| |