| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1024 |
|---|
| Symbol | |
|---|
| ID | 8120297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1180213 |
|---|
| End bp | 1181136 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644851421 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003003376 |
|---|
| Protein GI | 251788655 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.258701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATATG CACTTGAATT GGCGAATGTG ACTAAGACGT ACCCAGGCGG CGTTCGTGCG
TTGCGCGGTA TCGATCTGTG CGTTGAAGCC GGAGATTTCT ACGCTTTGCT GGGCCCGAAC
GGCGCAGGCA AGTCCACGAC TATCGGCATC ATTAGTTCGC TGGTCAACAA AACCGACGGC
AGGATTCAGG TCTTCGGCTA CGACCTGGAC CGGGATACGG TGAATGCCAA ACGACAACTG
GGATTGGTTC CGCAGGAGTT CAATTTCAAT CCGTTCGAGA CGGTAATGCA AATTGTAGTC
AGTCAGGCCG GTTACTACGG CGTGCCGCGG CCTGAGGCGG TACAACGCGC CGAGAAATAC
CTCAACCAGC TTGACCTGTG GGGCAAACGC AACGATCGCG CCCGGATGTT GTCCGGGGGA
ATGAAACGCC GGCTCATGAT CGCCCGGGCA TTGATGCATG AGCCCAGACT GCTGATTCTT
GATGAGCCGA CCGCCGGCGT GGACATTGAA TTGCGGCGCT CAATGTGGGG GTTCCTCAAG
GAGCTCAACG CGCAGGGGAC AACCATCATT CTGACCACCC ACTATCTGGA AGAAGCGGAA
ATGCTGTGCC GTAATATCGG CATCATCCAG GCCGGGCAAC TGGTGGAAAA TACCTCAATG
AAGGCGCTGC TGGCCAAGTT GCAATCGGAA ACCTTTATTT TCGATCTGGC GGCGAAAAGC
GCCTTGCCGA GACTTGAAGG CTATCAGCAT CGATTGGTGG ATACTTCCAC GCTGGAAGTG
GATGTCAAAA GGGAGCAGGG CCTGAACGGT GTTTTCAGCC AGCTCAGCGC ACAGGGGATT
CAGGTTCTCA GTATGCGCAA CAAGGCCAAT CGTCTGGAGG AACTGTTTGT GACTCTGCTC
AATAACAACG GAGATAAAGC ATGA
|
|---|
| Protein sequence | MTYALELANV TKTYPGGVRA LRGIDLCVEA GDFYALLGPN GAGKSTTIGI ISSLVNKTDG
RIQVFGYDLD RDTVNAKRQL GLVPQEFNFN PFETVMQIVV SQAGYYGVPR PEAVQRAEKY
LNQLDLWGKR NDRARMLSGG MKRRLMIARA LMHEPRLLIL DEPTAGVDIE LRRSMWGFLK
ELNAQGTTII LTTHYLEEAE MLCRNIGIIQ AGQLVENTSM KALLAKLQSE TFIFDLAAKS
ALPRLEGYQH RLVDTSTLEV DVKREQGLNG VFSQLSAQGI QVLSMRNKAN RLEELFVTLL
NNNGDKA
|
|---|
| |