| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0762 |
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| Symbol | |
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| ID | 8119485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 875671 |
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| End bp | 877740 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644851148 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003003120 |
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| Protein GI | 251788399 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTT CTGCATGGAA TTCAGAAAGT CTGTTTCAGG CCATCCTTGA CCGCTGCCCA
GTGGGCATCG CCGTTATCAA TTACGACGGA CACTATGTCA CCGTCAATCC GGCGTATGGC
GCCATCTATG GTTATACCCA GGAGGAAATG GCAGGCCGTT CTTTTACCAT GGTTTTTCCT
GAGTCCGCCC GCGATTCCGT ACTCGCCCGC CATCGGCAGT TTCTGGATGA AGGCGGTACG
CTGGGCGGGG AATGGACCGT GATGCGTCGT GATGGCGTCA TCCTGACCAT TTGGTCGGAA
TCCGTCCCCT TCGCGCAGCA TGGGCACAGA GCCGACCGAC TGGTGTATGT CCTTGATATT
ACCGAGCGCC AGAAAGCACG CGAACAGATG AAGATTGCCG CCGCCGTCTA TGAGAGCACG
CAGGAAGCCA TCATCGTCAT CAATACCAGC CGTAGCATTA TTTCCATTAA CCCGGCTTTT
ACCCGCCTGA CCGGATATAG CGCGGCCGAT GTCGTGGGGC AACCATCATA CATATTTCGT
TCGGACCGAC ACGACGCCGA TTTCTATACC GCCATGTGGC GTACTGTTGA CGAAGACGGC
GTGTGGGTAG GTGAAATGTG GGATCGCAAA AAAGACGGCA GCGATTACCT CAAGGAAATA
ACGATCAATG TGATCAAAGA CGCGGCAGGC ACACCCATAA ATTATGTCGG CGTATTTTCC
GATATCACCC AGCGCAAAAA GCAGGAAGCG CTGATTTGGC GGCAAGCCAA CTATGACGCG
GTTACCACCT TGCCGAACCG GCATCACTTT CAGGATAAGC TTGAGCGGGC GGTTGAGCAC
GCCAAACAGA GCGGCCGCCC AATGGCGCTG ATGTTGATAG ACCTCGACCA TTTCAAATCG
GTCAACGACA GCCTGGGACA TCGTGCCGGC GATGCGCTGT TGCTTGCGGT GTCGAACCGC
CTTACCGACT GTGTGCAAGG AGCCGATACC ATCGCCCGTC TGGGGGGAGA CGAATTCGCC
ATTATCCTGA CCGATCTGCA CCAAAACGGC GATAGTGGAT GCCTGGCCAG AACACTGCTC
GCACAGTTGG CGCAACCGTT CAATATCGAC GGAGAAAGTA TGCTGGTTTC AGCCAGCATC
GGTATTGCTC TCTTCCCCAA CGATAGCGAT ACGTTGGAAG AGCTGTTCAA AAATGCCGAT
CAGGCGATGT ATGCCGCCAA GAGCGCCGGG CGTAACTGCT TCAACTACTA TACGCCGGCC
CTGCATCAGG CTGCACGCGC CCGTTTACGC CTGACCAACG ACCTGCGCAC CGCAATCCAG
TGCGGTCAGT TCGAGGTCTA CTACCAACCC ATCATCGAGC TGAGCACCAA TAAAGTGGTC
AAGGCCGAAG CGCTGGTGCG CTGGCGTCAT CCCATCCGCG GCATGATAAG CCCGGCGGAG
TTTATCCCTC TTGCCGAGGA TACCGGGCTC ATCGTTCCGC TCGGCGACTG GGTCGCACGG
CAGGCCATTA CCCAACTGGC GCAGTGGCGC AAAATCTTCG ATCCCCATTT TCAGGTCGCC
ATCAACCAGT CGCCGGTGCA ACTGCGCAGC AAAGACTTCA CGGAAATGAC CTGGGTACAG
GAACTGGCCC AACACGGATT AGAGGGCAAC GCCGTGATCA TCGAAATCAC CGAAGGGCTG
CTGCTGAATG CGGAATCGCG GGTGAACGAC AACCTGCACC TGTTCCGTGA TACCGGGATA
CAAATCGCCA TTGATGATTT CGGCACCGGC TATTCATCAC TCGCCTACCT GAGGAAATTC
GACATTGATT GCCTGAAAAT AGACCGCTCC TTCGTCGAAG ATCTGGATGG CGTCGGGTTT
GAGTTGTGCG TGGCGATTAT CGCGATGGCG CACAGCCTTG GCCTCAAGGT GGTGGCCGAA
GGGGTCGAAA CCCAACAGCA GTGTGACACC CTCGCCCGTA TCGGGTGCGA CTATGCGCAA
GGGTTCCTGT TTTCACGTCC CGTTCCTGCC CCGGAGTTGA CGATACTCCT GCTCGCCGCA
GCCGAACCCT CCGTGATGAA ATCAGAGTAA
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| Protein sequence | MTGSAWNSES LFQAILDRCP VGIAVINYDG HYVTVNPAYG AIYGYTQEEM AGRSFTMVFP
ESARDSVLAR HRQFLDEGGT LGGEWTVMRR DGVILTIWSE SVPFAQHGHR ADRLVYVLDI
TERQKAREQM KIAAAVYEST QEAIIVINTS RSIISINPAF TRLTGYSAAD VVGQPSYIFR
SDRHDADFYT AMWRTVDEDG VWVGEMWDRK KDGSDYLKEI TINVIKDAAG TPINYVGVFS
DITQRKKQEA LIWRQANYDA VTTLPNRHHF QDKLERAVEH AKQSGRPMAL MLIDLDHFKS
VNDSLGHRAG DALLLAVSNR LTDCVQGADT IARLGGDEFA IILTDLHQNG DSGCLARTLL
AQLAQPFNID GESMLVSASI GIALFPNDSD TLEELFKNAD QAMYAAKSAG RNCFNYYTPA
LHQAARARLR LTNDLRTAIQ CGQFEVYYQP IIELSTNKVV KAEALVRWRH PIRGMISPAE
FIPLAEDTGL IVPLGDWVAR QAITQLAQWR KIFDPHFQVA INQSPVQLRS KDFTEMTWVQ
ELAQHGLEGN AVIIEITEGL LLNAESRVND NLHLFRDTGI QIAIDDFGTG YSSLAYLRKF
DIDCLKIDRS FVEDLDGVGF ELCVAIIAMA HSLGLKVVAE GVETQQQCDT LARIGCDYAQ
GFLFSRPVPA PELTILLLAA AEPSVMKSE
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